Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1664 |
Symbol | |
ID | 2739005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1718002 |
End bp | 1719042 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637160546 |
Product | hypothetical protein |
Protein accession | NP_972269 |
Protein GI | 42527171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000631476 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA AAATTTTTTT TGTAGCCGTA TGTTCACTTT TAGTGGTTTC GGCTTGGGCA CAGGCTCCTT CGATTGTTGG AACAGACTAT GTCCGCCCCG CAATTCACTA TGTTGAAGAA GGCACCAACT ATGTAAACAG TGATGTCTTT TTTAAACTAA GATCAACCGA TAAAGAAACC GGTCTTGACT TTGTAGAATT TGCCTTGAAT GGTGCAGATT TTATGAGATA CAAAAACCCC TTCCAACTTC TTGAAGAAGG AAAATATGAT ATTTCATACA GAGGATTTGA TAACAGCGGA AATCTGGAAT TGCCCAAAAC TTTGTCGGTA ATCGTAGATA ATACAGCTCC TGATACAATG ATCAAGACAA CAGCACCTTT GTACAATGAC GGTGTCGTAG TTTATTGCTC AGCCGATACA AAATGGTATG TTTCTGCAGC CGACATAGTC GGAGGATCAG GTGTAGCAGC CGGTTACATG GGAACGGATC TTAACTCTCT TAAAATATCC GGAAACGGAA AAGAGTCTGA ACAGACCTAT GTTTCCTTAG ATGGTGAAGG ACCTGTAAAC CTTTATTACA CAGCTATTGA CAATGTAGGA AACCTTGCTC CTATTAAGTT ACTCGCAGTT ACTATCGACA GGACAGCTCC CGTCGTAAGC ATTGCAAATT CAAACCGTCT TATCAACAAG GATGAGGAGT ACATGGTATT CCCCAGCGAT AGAGTTGTAG ATGAAGAAGG CAGAGTTATT GTTTCTACAA GTGAAACCGT TTCATTTGCA GCAAAAGACG ATCTTTCAGG CGTTGATGCA ATTTATGTAA AAGTAAATGA CGGAGAATAT ACCAAGTATG TAGAACCGAT CAGATTTACG CAAAATGCAG TTTACAAAAT CGAAGTTAAA GCTATCGATA ATGTAGGCAA TGTTTCTGAG CCTGTTATGT ACACATTCTA TGTAGATCAG ATTACACCTA ATTCGGAGGT TGATATAATC GACAGGTCAG GGAATCTTCT CCCGGCCACA ACCCCCGCAA ATGCCCAGTA A
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Protein sequence | MIKKIFFVAV CSLLVVSAWA QAPSIVGTDY VRPAIHYVEE GTNYVNSDVF FKLRSTDKET GLDFVEFALN GADFMRYKNP FQLLEEGKYD ISYRGFDNSG NLELPKTLSV IVDNTAPDTM IKTTAPLYND GVVVYCSADT KWYVSAADIV GGSGVAAGYM GTDLNSLKIS GNGKESEQTY VSLDGEGPVN LYYTAIDNVG NLAPIKLLAV TIDRTAPVVS IANSNRLINK DEEYMVFPSD RVVDEEGRVI VSTSETVSFA AKDDLSGVDA IYVKVNDGEY TKYVEPIRFT QNAVYKIEVK AIDNVGNVSE PVMYTFYVDQ ITPNSEVDII DRSGNLLPAT TPANAQ
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