Gene TDE1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1658 
Symbol 
ID2738999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1707745 
End bp1708821 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content34% 
IMG OID637160540 
Productbasic membrane protein, putative 
Protein accessionNP_972263 
Protein GI42527165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ACATTTTTAT TGCAGTTATG TTAGTCGGTT TTTTGGGCCT TTTGTCTGCC 
CAAAATGATT TACAGGTTAT TGCACAGGTA AATCTGTCAA AAAAGGAACC TATAACTCTT
GGTCAGCTTA AAAAGCTTGT AAAATTTGCC GAATCTCAGG GCGGAAATAT AGCTACAAAT
GATGATAAAA AGCTTGTTTT GGAAAGTTTA ATGCGAACCA AGCTTTTGGT TCAAGCTGCC
GAAAAAGAAA ATATCAAGAT TTCCAATTCC CAAGTTGATA ACGCTTTTAA CGATGTGCTT
TCTCAATATG TAAAATATCC AATAACAGAG AGCGAATTCG CTAAATTGAT AAAACAAAAA
GAAAACATAT CGCTTGACGA GTTTATGAAA AAACAAACAG GTTGTACTGT TGAAGAACTC
AAAAAAATTA TCAAAGATAA TCTTATAATT CAAAACTATA TAGCTTCAAA ACATCAAGCA
GAAATTGTAA AAATGGCAAC ACCTACAGAC GCTCAGATAC GTTCATACTA TGAAATGAAA
AAAGGTGAGT TGGTTCGTCC CGATATGGTC AAAATGCTTT TTGTCGCAGT AAAAAAAGAA
GGTAAAGACA AGGAAGAAAT AGATAAAATT AATGAATTGC ACAAAAAGGT TAAGAAGAAT
ATAAAAGAGA TTGCAAACAT CAAGAAAAAT GCAGAAGCCG GTAATTACGT TGCCCAAGAA
GGTTATATAC CTAAAACGGC AGAGGGTGCT CAGTTGTTAA ATGCTACTCC TGAAGCCTTA
ATGGAAATTT TCTCAAAAGA TGTAAACTAT ATATTCGATA TACAGGATAG GGTAGACAGC
AGACAGTTTT TTGTTATAAC GGAAAAGCTT AATGCCAAAA TTTTAACTTT AAGTGATGTC
CCTGATCCCT CATCTACAGT TACGCTTTAT GATCAGATAA AAGCCCTTCT TTCTCAGGGA
CTTGCACTAA ATGCTATTCA ATCTATCATT CAAACTACAT ATGAAGGTTT ACGCACCGAT
GATAATTGCA AGATATTAAA AAGCGATGCT GAACTTGATA AACTTCTTAA GTGGTAA
 
Protein sequence
MKKNIFIAVM LVGFLGLLSA QNDLQVIAQV NLSKKEPITL GQLKKLVKFA ESQGGNIATN 
DDKKLVLESL MRTKLLVQAA EKENIKISNS QVDNAFNDVL SQYVKYPITE SEFAKLIKQK
ENISLDEFMK KQTGCTVEEL KKIIKDNLII QNYIASKHQA EIVKMATPTD AQIRSYYEMK
KGELVRPDMV KMLFVAVKKE GKDKEEIDKI NELHKKVKKN IKEIANIKKN AEAGNYVAQE
GYIPKTAEGA QLLNATPEAL MEIFSKDVNY IFDIQDRVDS RQFFVITEKL NAKILTLSDV
PDPSSTVTLY DQIKALLSQG LALNAIQSII QTTYEGLRTD DNCKILKSDA ELDKLLKW