Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1643 |
Symbol | |
ID | 2739752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1693649 |
End bp | 1694641 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160526 |
Product | PASTA domain-containing protein |
Protein accession | NP_972249 |
Protein GI | 42527151 |
COG category | [S] Function unknown |
COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCTTG GTGATATTGC AGACAGCATA GAAAGTAACG GAAAAGTGAT AGTTATTACT TCTTTAGTAA TGCTTGTGTT TTTTATTATT GTTTCTACAA TCGTGTTTTT TATGTCGGTA AAAACGGCCG ATCAAGTTTT GGTTCCTAAT ATCGAAGGCG AAAAATTTGA AGATGCGGTT CTTAAACTAC AGGTTAAAGA ACTCTATCCT CGTCTTCAGT TAAGATTTTC GGATAATACC GAAGATGCAG GGACGGTTTT AGAGCAAAGC CCTCCTGCAG GAACTATCGT TAAAGCCGGA AAAAGAATAA CTGTCACTGT AAGCAGTGGT GCCGTTCTTG ACAGAGTAGA AAATTATGTG GGAAAAACCT TATCGGAGGT TCAACAGCAT TTTGCCTCTC TTTTTACTTC AGGCCGTAAA CAGTTGATTT CGATAAAAGA ACCGATTATG TACAAATCAA GTTCAATTCC TGCCGGTACG ATTTTGGAGC AAAATCCCGC TCCGGATACA AAGATATCCG AAGGCGTTTT TATTGAATTT ATTGTAAGCA AGGGCCCTGA AAATGAGAAG GTTTCCGTTC CAAACATGGA AGGGCTTAAA CTTGACGATA TTTATTCTGC AATAGCTCAA AGTAAAATTT CATTTGTAAT AAAAGCCGAA GTCAATTCTT CTCTTGATGC CCCGGTTGTT GTCAGTCAAA GCCAGCCGGC AGATTCCTCT ATAGATGCTT ACTCTCAAAT AGAATTAGGT ATGCAATTCC CCGATTCTAC CGAAAAAATG GTTTACGGTG TTTATTCGCC TGCTTTACCT AGATATCCTT ATCCGGTAAA AGTTACGGTT GATGCCGTAT ATCCTGACGG AAAGAGAAAG GAGCTTATAA GTTTTAATCA TCAGGGAGGA AAATGCAGCA TTCCTTACGG TCTTCCCCAA GGGACGGTTC TTGTTCTAAC CGTATTAAAC AAACAGGTTC AAATGTTTGA AGTAAAACAA TAG
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Protein sequence | MGLGDIADSI ESNGKVIVIT SLVMLVFFII VSTIVFFMSV KTADQVLVPN IEGEKFEDAV LKLQVKELYP RLQLRFSDNT EDAGTVLEQS PPAGTIVKAG KRITVTVSSG AVLDRVENYV GKTLSEVQQH FASLFTSGRK QLISIKEPIM YKSSSIPAGT ILEQNPAPDT KISEGVFIEF IVSKGPENEK VSVPNMEGLK LDDIYSAIAQ SKISFVIKAE VNSSLDAPVV VSQSQPADSS IDAYSQIELG MQFPDSTEKM VYGVYSPALP RYPYPVKVTV DAVYPDGKRK ELISFNHQGG KCSIPYGLPQ GTVLVLTVLN KQVQMFEVKQ
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