Gene TDE1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1611 
Symbol 
ID2740852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1659841 
End bp1660494 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content29% 
IMG OID637160493 
Producthypothetical protein 
Protein accessionNP_972217 
Protein GI42527119 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCA AAAAAAGACC TGCTTACAAT AGCAGAAAAG AACATGTACA TCCGTTTGAG 
GCTTATGTTC TGGAAAATAC GAATACCCTA ATACTGGGTA CTTTCCCCGG AAAGAAGTTC 
ACAGATCCTA ATAAAGAGAA TGACAAAGAA GATTGGTATT ATGGAACAGA TCGTAACGAA 
TTTTGGGCAT TAATAGAATA TGCTTTAGGC TGTAAACGAA ATTCATTGCA AACAAAAGAC 
GAAAAACAAA AGTTTCTAAC AGAACACAAA ATAGGCATAA CAGATATTAT CAAAAAAGCA 
AGACGCAGGC AAAATAATAA TTTAGATATA AATCTTAATG TTATAGAAAT TACTAATCTA 
GATTTCATTA TTGATAAATG CAAAGACATT CATATGATAA TTTTGACTTC CAAAGACATG 
TATACAAGAT TTTTTATACC ATACTATGTA AAAAAATATA ATGCTATTTT TAAAGAAGAC 
AAGAATAAGG AACCGGAAAC TCATGAAGAG AAAGGTAAAA AAATAAATAT CTATTATTAT 
ACTTTTAAAG GAAGACCAAT TCGTGTTGTC CCATTGCACA GTCCCGCAAG AAAAAATGTA 
TCAATCAAGA TAAAAAAAGC ACTATATAAA TATATACTAA AAAATAATAA GTAA
 
Protein sequence
MTSKKRPAYN SRKEHVHPFE AYVLENTNTL ILGTFPGKKF TDPNKENDKE DWYYGTDRNE 
FWALIEYALG CKRNSLQTKD EKQKFLTEHK IGITDIIKKA RRRQNNNLDI NLNVIEITNL 
DFIIDKCKDI HMIILTSKDM YTRFFIPYYV KKYNAIFKED KNKEPETHEE KGKKINIYYY 
TFKGRPIRVV PLHSPARKNV SIKIKKALYK YILKNNK