Gene TDE1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1595 
SymbolcbiD 
ID2739792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1645038 
End bp1646129 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content42% 
IMG OID637160477 
Productcobalt-precorrin-6A synthase 
Protein accessionNP_972201 
Protein GI42527103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGG ATTTATATAT CGACAAAGAC GGACAAAAGC TAAGATGCGG ATATACGACG 
GGGAGCTGTG CGGCGGCGGC GGCTAAGGCA GCGGCCTTGA TTTTGGGCGG TGAAACTATG 
ACCTCGGTTA AAATCGATAC GCCTGCAGGA CTTGTCCTTG ACCTTCCGGT AGAGCATTGC 
CGCTCATATA AAAACAAAGA CGGGACAGCT ATTGGAGAGG CAGCCGTTCA AAAAGATGCG 
GGAGACGACC CGGACAGCAC CGACGGCATC TATATCTATG CTCGGGTATC TTATAGAAAC 
GATGGGAAGG TTCTCATTGA TGGGGGAGAG GGTATAGGAA GAATTACCAA AAAAGGTCTT 
TTCGGAGAAG TAGGGGAGGC TGCCATTAAT CCCGTACCCC GTCAAATGAT AGAAAAAGAA 
GTTTTAAAGG TTTCAAAAAA GGGCTTCAAT GTAGAAATTT TCAGTCCTCA AGGAGCCGAA 
ATCGGCAAAA AAACATTTAA TAAAAATATC GGTGTTGAAG GCGGCATCTC TATTATAGGT 
ACAAAGGGCA TAGTCTATCC TATGAGCGAG GATGCTATCA AAAAAACCAT CTATCTTGAA 
ATAGACGGAA TATTACAAAA TTCGGAAAAA AAAGAAATAC TTTTGGTACC CGGAAACTAC 
GGGGAAGGCC TTAAAGAAAA ACTAAACACT ATAATAGACC TTCCCACCGT AAAAATTTCA 
AACTATATAG GAGATAGTTT AAGCTATGCC TATTCTAAAG GCTTTAAAAC CATGACCTTA 
CTCGGACACA TAGGTAAATT CGCTAAACTT TCCATAGGTA TTTTTAACAC CCATAACCGG 
ACCGCCGACA CGCGCATGGA AGCCTTTGTC TACTACCTTG CCATGCATGG GGCAGACAAA 
AAAACAATCG AAACGGTCAA TGCCTTTTTA ACGGCTGAAG AAGCCTTCAA CTATCTTGTT 
GAAAACAAGA TTGAAATGAT TCTCAAAGCC ATGGAAAGAG GAGCCGAAGA AAGAATCAAA 
AAATACCTCA AGGATGACAG CCTTTCGATA AGGGTTTTAA TCTATTCGAT GAAATACGGC 
CTTATAGAAT AA
 
Protein sequence
MKLDLYIDKD GQKLRCGYTT GSCAAAAAKA AALILGGETM TSVKIDTPAG LVLDLPVEHC 
RSYKNKDGTA IGEAAVQKDA GDDPDSTDGI YIYARVSYRN DGKVLIDGGE GIGRITKKGL 
FGEVGEAAIN PVPRQMIEKE VLKVSKKGFN VEIFSPQGAE IGKKTFNKNI GVEGGISIIG 
TKGIVYPMSE DAIKKTIYLE IDGILQNSEK KEILLVPGNY GEGLKEKLNT IIDLPTVKIS 
NYIGDSLSYA YSKGFKTMTL LGHIGKFAKL SIGIFNTHNR TADTRMEAFV YYLAMHGADK 
KTIETVNAFL TAEEAFNYLV ENKIEMILKA MERGAEERIK KYLKDDSLSI RVLIYSMKYG 
LIE