Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1593 |
Symbol | |
ID | 2739790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1641299 |
End bp | 1643089 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637160475 |
Product | Fe-hydrogenase |
Protein accession | NP_972199 |
Protein GI | 42527101 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAACT TGACTATAGA TAATATAAAA ATATCGGCTA AAGAAAACAT GACGATTATG GAAGCTGCAG AAAGCGCCGG AATCCCTATA CCGAAACTTT GTTTTTTAAA AGGAATAAAT GAAATTGCTG CCTGCCGTGT ATGTGTTGTT GAACTGGAAG GAAAAGAAAA ACTTATAACC GCTTGTAATA ATTCCGTTGA AGAAGGAATG GTTGTATACA CTAACAGCCC CAAGGTAAGA ATTGACAGAA GAAGAACCGT TCAGATGATT TTGTCACAGC ATGATTGTAA GTGTGCCATC TGTGTAAGAA GCGGAAACTG TACCTTACAA ACTCTTGCAA ACGATCTTAA CATTCAAGAT GTTTTATATG AAGAACAGCT TGAAGATCAG CCATGGGATA AGAATTTTCC TCTTATACGG GATTCAAAAA AATGTATTAA ATGTATGCGC TGTATTCAGG TTTGCGATAA GATCCAAAGC CTGAACATTT GGGAGTTGGA AGGAACGGGA GCAAGAACTA CAATAAATGT TTCAGGCTCA AGGACTATAG CCGATGCAGA CTGCTCTTTA TGCGGTCAGT GTATTACCCA TTGTCCCGTG GGTGCCTTAC GTGAAAGAGA TGACACGGAA AAATTCTGGA GGGCAGTTGC AAATCCTGAT AAGGTTGTTG TCGTGCAAGT AGCCCCTGCA ATACGTACGG CTTGGGGAGA ACATATCGGC CTTGATCTAA AAGATGCTTC CGTAAACAAA ATATTTGATG CATTAAAAAG AATAGGAGCC GACTACGTAT TTGATACAGC CTTTTCGGCA GATTTAACCA TAATGGAAGA AGCCTATGAA TTTATTGAAC GTTTTTCGAA GGGAGAGCTA AAAGATAAAC CGATGTTTAC CTCCTGTTGT CCCGGATGGG TTCGCTTTAT AAAAAGCCAA TATCCTCATT TGGTTTCTCA TCTATCTTCC GCTAAGTCTC CCATGCAGAT GTTCGGTGCG GTTATGAAGT CATATTTTGC AGAAAAAATC GGTAAAAAAC CTGAGGATAT TTTCTCTGTA GCTATTATGC CCTGTGTTGC AAAAAAAAGC GAAATCGATA TGGAGCTTTT CTATGGAGAG TATGCAGGAC ATGACATGGA CTGTGTTTTG ACTACGCGGG AATTTGTAAG GATGCTTAAG TCTGCTCATA TTCTCCCCGA AACCCTTAAA GAAACGGAAC CCGATAAGCT TTTCCATGAT GCTTCAGGAG CCGGAATTAT TTTCGGAGCT ACAGGCGGTG TTATGGAGGC CGCCTTACGT ACAGCCTATT ATGCCATTAT GGGAAAAAAT TGTCCGCCGG ATGCTTTTAA GGTTGTAAGG CATTCTTCGC AAGAAGAGTC GGGCATTATT GAAGCATCTT TTACCTTAAA AGAAAATAAT TTACGGATTG CCGTAACCAG CGGACTTGCC AATACCAGAC GGCTTATAGA TTCTATAGAA GCAGGCGAAA AACACTATGA TTTTGTAGAA ATTATGGCTT GCCCCGGCGG ATGCGTAGGA GGCGGAGGGC AGCCGATACA TGAATCCGGT GAATTAGCTG TTAAAAGAGG CAGTAATTTA TACTTTATCG ATAAGAACTC AAAAGTGCGG TATTCTCATG AAAACGAATG CATAAAAGCT CTCTATAATG ATTTCTTTGA AAAGCCGAAC AGCCACAAAG CGCACAGTCT TTTACATACG GACCATTTTA TATGGGAAAT GCCGAGAAGT CCGAAGCGGG ATCGAAAGGG CTATGTTATA AACGAGAAAT TTCAATCATA A
|
Protein sequence | MVNLTIDNIK ISAKENMTIM EAAESAGIPI PKLCFLKGIN EIAACRVCVV ELEGKEKLIT ACNNSVEEGM VVYTNSPKVR IDRRRTVQMI LSQHDCKCAI CVRSGNCTLQ TLANDLNIQD VLYEEQLEDQ PWDKNFPLIR DSKKCIKCMR CIQVCDKIQS LNIWELEGTG ARTTINVSGS RTIADADCSL CGQCITHCPV GALRERDDTE KFWRAVANPD KVVVVQVAPA IRTAWGEHIG LDLKDASVNK IFDALKRIGA DYVFDTAFSA DLTIMEEAYE FIERFSKGEL KDKPMFTSCC PGWVRFIKSQ YPHLVSHLSS AKSPMQMFGA VMKSYFAEKI GKKPEDIFSV AIMPCVAKKS EIDMELFYGE YAGHDMDCVL TTREFVRMLK SAHILPETLK ETEPDKLFHD ASGAGIIFGA TGGVMEAALR TAYYAIMGKN CPPDAFKVVR HSSQEESGII EASFTLKENN LRIAVTSGLA NTRRLIDSIE AGEKHYDFVE IMACPGGCVG GGGQPIHESG ELAVKRGSNL YFIDKNSKVR YSHENECIKA LYNDFFEKPN SHKAHSLLHT DHFIWEMPRS PKRDRKGYVI NEKFQS
|
| |