| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1579 |
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| Symbol | |
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| ID | 2739776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1626164 |
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| End bp | 1627579 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637160461 |
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| Product | fibronectin/fibrinogen-binding protein, internal deletion |
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| Protein accession | NP_972185 |
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| Protein GI | 42527087 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00739832 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAA ACAATAAAGA AATAGATCTA ATTCTTGAAG AGCTGAAATT AGAGGGCTTT
TTTATTCAAA AAATAATTCA GCCCTCTTAT ACAGCCTTGG TCTTTTATCT TTACAAAGAT
AAACCTCTTA CTCTTTTTAT TTCTCTTGAT GCCGGAGCAT GCCGGCTTCA TTCTACACGT
AAAAAAATTC CTAAATTCGA TAAGCCTATG CGTTTTATGG AGCTTTTAAA ATCCAGAATC
AAGGGCGGGA AAATTCTAAA AGCGGAACAA CTAAACGAAG ACAGAATCAT ACGTCTTCAC
ATTGCAAGCG GAGCAGGGGA CTTTTTTTTA TATTTAAGGC TGTGGAGCGG GGCTGCAAAC
ATAGTTTTAA CCGATGAAAA TAACCTTATA ATCGACGCTT TTTACCGCCG GCCTAAGAAG
GGAGAAATAT CAGGCGGAAC TTGGCTGACT CCAGAACCTC AAAAAATAAA AAAACAAGAT
TATTGTGTTC GCGAGTATGA CAAAACAAAA ACTTTTAATG AGGCTGTCGA AGAATGGTAT
ATTAATAATG CTCCAAAGGT TTCAAAAGAA GCCCTGCTGG ACGAGGCCGA AAACCTTTAC
GGAACTAAAA TATTAAAAAT CGAAAAAGCT CTTTTAAAAC TTAAAGCAAA AAGGGAAGAA
TTTTTAAATG CTCAAAGTTT AAAAAATGCA GGAGATTTGC TTTTTTCAAA CCTTCATCTG
ATAAAAAAAG GAATGAAATT TATAGAACTT GAAGATTACA CAAAAAACGG TGCAAAAATA
ACTATTACTT TGGAGCCCCT AAAAACACCC CAAGAAAATG CGAATCTCTA TTATGAAAAA
TATAAAAAAG CCGTTTCGGG TTTAGAGGCC TTGGAAGAAG ATATTATATC GGCCGAAAAA
GAAATAGAAA AACTAAAAGA AAAAATAGAA AAAATTAAAA CGGAAGAAAA CCCTTATTTA
ATTCAAAAAA TTCTTCAAAA AGAAAAAATT CCGGTACAGC AAAAAGCTAA AAATACGAAG
AGTGCTCCGG GTTTAAAATT CTTTTCGGAA GGTTGGACTA TTTTAGTAGG CCGAACGGCA
GCTGAAAATG ATGAGCTTTT GCGTCATTTT GTTAAGGGTA CAGACCTTTG GCTTCACACA
AGGGATTATG CAGGCGGCTA TGTTTTTATA AAGGCTAGGG CAGGGAAGAG TATCCCCTTA
CCTGTTTTGA TTAAGGCCGG AAACCTCGCA GTCTTTTATT CAAAGGCGAG AAAAAACGGA
CAAGCCGATC TATATACCAC TCAGGTAAAA TATTTACGCA GGGCAAAAAA CGCACCCAAA
GGAACCGTTC TTCCTACACA TGAAAAAAAT CTTTCCATAA AACTGGATGA AAAAATCTTA
AAACAATTGG AAGAAGAAAA AATATCTGCT TTATAA
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| Protein sequence | MSLNNKEIDL ILEELKLEGF FIQKIIQPSY TALVFYLYKD KPLTLFISLD AGACRLHSTR
KKIPKFDKPM RFMELLKSRI KGGKILKAEQ LNEDRIIRLH IASGAGDFFL YLRLWSGAAN
IVLTDENNLI IDAFYRRPKK GEISGGTWLT PEPQKIKKQD YCVREYDKTK TFNEAVEEWY
INNAPKVSKE ALLDEAENLY GTKILKIEKA LLKLKAKREE FLNAQSLKNA GDLLFSNLHL
IKKGMKFIEL EDYTKNGAKI TITLEPLKTP QENANLYYEK YKKAVSGLEA LEEDIISAEK
EIEKLKEKIE KIKTEENPYL IQKILQKEKI PVQQKAKNTK SAPGLKFFSE GWTILVGRTA
AENDELLRHF VKGTDLWLHT RDYAGGYVFI KARAGKSIPL PVLIKAGNLA VFYSKARKNG
QADLYTTQVK YLRRAKNAPK GTVLPTHEKN LSIKLDEKIL KQLEEEKISA L
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