Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1578 |
Symbol | |
ID | 2739775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1625510 |
End bp | 1626169 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637160460 |
Product | phosphoesterase, putative |
Protein accession | NP_972184 |
Protein GI | 42527086 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.223448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACTCTT TGGAGTACTT TAATAAGGGA ATTTTTGCAT CTCCTGAAGC TCTTGAAAAA CTAAAATCTG CCGAAAAAGC ACGCCTTATT TTAATTTCGG ATACACACGG TAATGTAGAT ACTATAATTG ATATTTTGGG CCGCGAGGGA AAAAAATCCG ATGCCGTTTT ATTTTCAGGA GACGGCCTTG CAGATTTTTT AAATTATATA ACGATTTCAC AATATGAAAA AGAGCTGATG GAATGTATGC CTCCTGTAGC AGCCCTTGTT ATGGGAAATT GCGATTCAAA AAAATATGTT CTAAATTTAG ATGCAAGAAA AACGGGAGCG GATTTCGGCT TTAAAAAAAA TCCCGAACGA TATTTGGAAT TTTTTGAATT TCTTTTTTTA GAGACTTGCC GTAAAAAAAT TCTTTTAACC CACGGGCATG AATTCTATGT AGATTTTGAA TTAAACACTC TTTTAAATTT TGCACGGCAG CAAGACTGCT CGGTTGCGGT TTTCGGCCAT ACCCATGTAC CATTAATTAA AGAAGTAAAC GGAATATTTT TGATAAACCC CGGTTCGGTA TCAAGACCTA GAATGGGCTC AAATAAAAGC TATGGAATTT TAACTATGAG CAAAGATGCA AAACCGTCAA TGGAATTTAA AAATTTATAA
|
Protein sequence | MNSLEYFNKG IFASPEALEK LKSAEKARLI LISDTHGNVD TIIDILGREG KKSDAVLFSG DGLADFLNYI TISQYEKELM ECMPPVAALV MGNCDSKKYV LNLDARKTGA DFGFKKNPER YLEFFEFLFL ETCRKKILLT HGHEFYVDFE LNTLLNFARQ QDCSVAVFGH THVPLIKEVN GIFLINPGSV SRPRMGSNKS YGILTMSKDA KPSMEFKNL
|
| |