Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1575 |
Symbol | lipA |
ID | 2739325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1622043 |
End bp | 1622915 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160457 |
Product | lipoyl synthase |
Protein accession | NP_972181 |
Protein GI | 42527083 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00830336 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA AGGCTGGGTT TATGACTTGT AATCAAAGAA AACCTGATTG GTTAAAAATA AAACTTCCTA CCGGAGAACT TTCACAGGAA GTATCGAATA CAATAAAAAT ACATAAATTA AATACTATAT GTACCAGCGG CAAATGTCCC AATCAGGGAG AATGTTGGAG GTGCGGAACT GCAACATTTA TGATTTGCGG AAATATCTGT ACGCGTGCAT GTAAATTCTG TAATGTGCCT ACCGGTTGCC CATTGCCCCT AAATCCTAAT GAGCCGATGG AAATAGCTCA ATCGGTTGAG GCTTTAAAAT TAAAACATGT AGTTTTAACC TCGGTAGATA GGGACGATAT AAAAGATTTC GGTGCTTCCC ACTGGGTAAA GGTTATAAGA GCCGTAAAAC AAAAAACACC GAATGTTACT ATGGAAGTTT TAATTCCCGA TTTTCAAGGC CATGAAGATT TGGTATCGAT GATTATCGAA GCAAAACCTG AGGTAATTTC TCATAATCTT GAAACGGTAC GCAGGCTTTC TCCCCATGTC AGGAGCAGGG CTACATATGA TACTTCTCTC AAAGTTTTAA AACAAATTGC AGACTCCGGC TTGGTATGCA AATCAGGTAT TATGTTGGGG CTGGGGGAAA CAAGGGCTGA AATTTTAGAA ACCATGGACG ATTTACGCAA AATAAACTGC AAAGTTATGA CCATAGGCCA ATACCTCAGG CCCTCTATAA AAAACATTGA GGTTAAAGAA TATGTAAGGC CTGAAGTCTT TGAAGAATAT AAACAAATAG GTTTGGAGAA GGGCTTTTCT TTTGTGGAAA GCGGTCCCCT TGTTCGTTCC AGTTATCATG CCGAAAAGCA TGTGTTGAGC TAA
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Protein sequence | MNFKAGFMTC NQRKPDWLKI KLPTGELSQE VSNTIKIHKL NTICTSGKCP NQGECWRCGT ATFMICGNIC TRACKFCNVP TGCPLPLNPN EPMEIAQSVE ALKLKHVVLT SVDRDDIKDF GASHWVKVIR AVKQKTPNVT MEVLIPDFQG HEDLVSMIIE AKPEVISHNL ETVRRLSPHV RSRATYDTSL KVLKQIADSG LVCKSGIMLG LGETRAEILE TMDDLRKINC KVMTIGQYLR PSIKNIEVKE YVRPEVFEEY KQIGLEKGFS FVESGPLVRS SYHAEKHVLS
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