Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1522 |
Symbol | citC |
ID | 2739728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1567920 |
End bp | 1568948 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637160402 |
Product | citrate lyase ligase |
Protein accession | NP_972128 |
Protein GI | 42527030 |
COG category | [C] Energy production and conversion |
COG ID | [COG3053] Citrate lyase synthetase |
TIGRFAM ID | [TIGR00124] [citrate (pro-3S)-lyase] ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATT TACAAAAAAT TAACCTAGAG CTTAAAAGTC AAAAAGAAAA ATTTACAGCT CTTTTAAAAG AAAACGGCCT TATTGCGGAC TCCCTTGAAA GTGTTTACGG CATTTTTGAT GAAGCCGACA ATTTGGCCGC TTGCGGAGGG CGGGAAAAAA ATATCTTAAA ATGCTTTGCC GTAAAAGATG AATTTAAGGG TCTTGGTCTT ACCGACGAGA TTTTATCGGC CCTCTTAAAA GATGCTTACG GAGAAGGTTA TAAGTTCTTT TTTATATTTA CAAAAAGATC AAGCGTTTCC TTTTTTACGG GGGCAGGATT TATAAACTTA GCCTCATCGG ATGATTCTTC CTTATTATAC AGGGGAGAAA AAACCGTAGA GAAGGTTTTA AAGAATGAGC TTTTTCCTTA TTGCCCTGAC GGTATACTTG GCAGTATAAG CGATGAGGGA AATGCAGCTA TAGTTATGAA TGCAAATCCC TTTACCCTCG GCCACAGATA TTTAATAGAA AAAGCCTTAG ACTATTGCGG AAGTAAGAGC CGCCTTTTTG TTTTTGCCGT TGAGACAGAC AAAAGTTTTT TTTCTTTTAA TGACCGTTTT ATGCTTATCA AAAAAAATAC GGAAGACCTA AAAAATGTAG TAGTGCTTCC CTCATCTCAA TTTTTAATAA GCGGGGCGAC ATTTCCGTCC TATTTTTTAA AAGAAAAAAG TTTAATAAGC AAAAATCAAA CTCAGCTTGA TGCAAGGATA TTTTTAAAAT ACTTTGTACC TCTTTTTAAT ATTAAAATCC GCTTTTTGGG AGAAGAACCC TTAGATCCGA GTACCGAAAT ATATAATCAA ACTCTATTGA ATGAGCTTCC TCCTCAATGT GAGGTAAAAA TAATTGAGCG TAAAAAAACT CAAAATCAGC AAATCATTTC CGCAACGCAG GTTCGAAAGG CATTTCAAAA TAATAGTCTT GAAGAAGTAC GTTCCTTTTT ACCCGAAATA ACTTATAATT TTTTAAGGTC TTTAAAACAA AAAGACTAA
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Protein sequence | MTNLQKINLE LKSQKEKFTA LLKENGLIAD SLESVYGIFD EADNLAACGG REKNILKCFA VKDEFKGLGL TDEILSALLK DAYGEGYKFF FIFTKRSSVS FFTGAGFINL ASSDDSSLLY RGEKTVEKVL KNELFPYCPD GILGSISDEG NAAIVMNANP FTLGHRYLIE KALDYCGSKS RLFVFAVETD KSFFSFNDRF MLIKKNTEDL KNVVVLPSSQ FLISGATFPS YFLKEKSLIS KNQTQLDARI FLKYFVPLFN IKIRFLGEEP LDPSTEIYNQ TLLNELPPQC EVKIIERKKT QNQQIISATQ VRKAFQNNSL EEVRSFLPEI TYNFLRSLKQ KD
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