| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1518 |
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| Symbol | |
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| ID | 2739724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1564424 |
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| End bp | 1565635 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637160398 |
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| Product | permease, putative |
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| Protein accession | NP_972124 |
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| Protein GI | 42527026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000418137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATT TACAAACAAA AAAACTGACC GTGTTTGAGC TTGCAAAATT AAATATCAAA
AGAAAACCTT TTAGAACTGC AAGCCTAATT ATTCTGACGG CTGTTTTAGC CTTTAGTCTT
TTTGCAGGCA GTTTTTTGGT AAAAAGTTTA AGGGGCGGAA TGTTGTCGCT TTCAAATCGT
CTGGGTGCTG ATATTATTGT CGTGCCCCAA GGTTATGACT CAAAGATTGA AAGCGCCTTA
TTGAGAGGGG AACCTAATAG TTTTTATTTT GATACGGAAG TCGTAGAACG TGTGAAAAAA
ATTGAAGGGG TTGAACTTGC ATCTCCCCAG CTTTTTATTG CGACCCTCTC TGCAGGCTGC
TGTTCTTTTC CTTTACAGAT TATAGGTATC GATTTTGATT CAGATTTTAA TGTAAAACCT
TGGCTTAAAA AACAGATAAA ACTACCTCTT TTGGATAATC AAATTGTAGC CGGAAGTAAT
ATATCAGGTG ATTATAATTC TCAAGTAAAA TTTTTTAACC AACCTTTTGT GATTGCAGGC
CGTTTAACTA AAACTGGAAT GGGGTTTGAT AATTCTATTT TTATGACAAT AGAAAATGCA
AGGAAGCTTG CAAAAGAGTA CGAAAGAATT ATGCAGCATC CTGTTGCAAA AAATGAAAAT
TTGATTTCAA GTGTTATGGT AAAGATTAAT CCGAGATACG ATGCAGGTGA GGTAGCTAAA
AAGATAAGAG AAGAATTTAA GGGAGAAGAA ATTTATCCTT TAATATCGAA GAGGATGATG
ACAAATATAT CTTCAAGTAT TTCAAGCTTA AATATCTATG TTTATATCCT TATTGCAATC
CTATGGATTC TTTCATTTAT CGTGTTGGCT GTTTCTTTTT CTTCGATTTT TAATGAGCGT
AAAGAAGAAT TCGGAATGTT GAGGATAATA GGAAGTACCA AAAAGAAATT ATTTGAACTT
GCGGTTTTAG AATCTCTTAT GATAAGTATG TCGGGAGCAA TTATAGGAAC GGTTCTTTCA
TGTTTGATTA TGTTTTTATT TAATCAGGCA ATTGTTACAG GAATGAAGAT GCCTTTTTTA
AACCCTTCTT TTCTTTGGAC ATTTGTTTGC TTTCTTTTGA CCTTTGCCCT TATTTCGGTA
ATAGGCCCCC TTGCAGCCCT TAAAACTATG TATAGTTTTA CAAAAGAAGA ACCGGCTTTA
TCAAAATCTT AA
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| Protein sequence | MENLQTKKLT VFELAKLNIK RKPFRTASLI ILTAVLAFSL FAGSFLVKSL RGGMLSLSNR
LGADIIVVPQ GYDSKIESAL LRGEPNSFYF DTEVVERVKK IEGVELASPQ LFIATLSAGC
CSFPLQIIGI DFDSDFNVKP WLKKQIKLPL LDNQIVAGSN ISGDYNSQVK FFNQPFVIAG
RLTKTGMGFD NSIFMTIENA RKLAKEYERI MQHPVAKNEN LISSVMVKIN PRYDAGEVAK
KIREEFKGEE IYPLISKRMM TNISSSISSL NIYVYILIAI LWILSFIVLA VSFSSIFNER
KEEFGMLRII GSTKKKLFEL AVLESLMISM SGAIIGTVLS CLIMFLFNQA IVTGMKMPFL
NPSFLWTFVC FLLTFALISV IGPLAALKTM YSFTKEEPAL SKS
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