Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1398 |
Symbol | |
ID | 2741265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1437332 |
End bp | 1439518 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637160277 |
Product | hypothetical protein |
Protein accession | NP_972004 |
Protein GI | 42526906 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGG CATGGACATT AAAGAAAAAT AACAGCGGAA AGTGGTTTTT AACCTTTACA GCCTTAATTG AGTCTGAAAA TTGCCCCTCA GCCGATGAGA TTCATCTTGA GGCAAAAAGA AAAGGAATAA AAAGCTCATC TCTGGTAAGT AAAAAAACTA TTGAGGACTA TTTAAAAAAA CATACCGGCT CCGGCATAGA ACCCGTTTCA CTGCCGCTTG AGCTTGATCC CAACTTTGAT GCAAGAATTA CGACAAATAA CGACAAAACG GCGGCCTATC TCTATGTAAG AAAGGCTGCC GATTCCGCTA ACGAAGTGGA CATGTCTACT ATAAACAGAC TTCTCCAGAG AAGTAATATT GCAAATATCG ATACGGAAAA AGTAAAAGAA GGTTTAAGCG ATTTTATAAA TTCTTCAGAG ATGGAATTCT CGATGCAGAT TGCTGAAGGT TCTCCCCCAA AAAGAGGGCC CGATAAAAAA CTTATTACTC ATTTTGAGCA AATACCTGAC CATGAGGTAC AGCGTTTGGC AGACCGTTTA AAGAGGCCCG ACTTACGTAC CCCTGATGTG GAAAACCCCA CGACAGACAA AGATTATCCT CTTTCCGAAG CTGAAACCCT TACGGTTGTC GAAAAAGGCG ACCTTATTTA TGAGGTTGAA GATGCAGGAT TGGGAGAGGC CGGTGTTGAT GTATACGGTC AGTCTATTCC CGGGCTTCCG GGCAATGACC CTTTTTTCTT GGATTTACGA AACATAGTAC AAAACCATTC AGAGTTGCGT GCAGGAGAAA CCGGCCTTCT TTTAATAGCA AATACCGAAA GAGGTTTAAA GATTCGCATA GTTCCATATA GGGATGCAAA GGTAAGAGCG GTAATAAGCC GCGATAAGAT GGAAGTTTCT CTTATTTTGC AGTCGGGACT GGGTGCAGGA GAAAGACTTT CGGTAATAGG CGTAAAAACC GCATTAAACG AAGTCAACCT TCTCGACTCA ATTTCGGACG CAAAAATAAA CGAAATTATA GAATCTGCAA GAAAGGTAAA CGATGAATGC GAGTTTGTAA TATTAAGCGG AACTCCTCCG ATTGCTCCCG GCTCTTATAG GCTTGAATGG TCGATTAAAT TTAATGAAGA GCTTAGTACG GCAACTGTAG AAAAGGATGC TCTGATTTTG ACAGCCCGTC TTTTACCTAA GGGAGAAAAG GGTAAAAATG TTTTTGGTGA GTTGATTGAC CCTAAAAATG CCGAGCCAAC GGATTTGCCT GCTAATGATG AAACAATAAA AGTTACCGAA GAAAAGCACG TTATTAAGTT TTTTGCTGCA GAATCGGGAG AGCTTTCTTT TTTTAACAAT GCCCTTGTAA TATCTTCGCT TAAAACCATT CAAAGCGATA TAGATACCAA ATTCGGCGAT ATAAGTTTTC CCGGCAACCT GATTATTACC GGAGATATTA AAGATGACGT AAAGGTAAAA TCAAAGGGAA AATTGACAAT TACCGGAACT GTAGAAAAAG CTCTGATTTA TTCTGAGGAT TCTCTTACCT TAAACGGCGG TATAAACGGA AAGGGAAGGG GAACCGTTTG GGCTAAGGAT AAAACCGATT TACAATATGC GGAAAATGCC AGAGTTTTTT CGGGCGGCGA TATAAGTATA GCTTCTTACT GTTTTAAGTG TTTGGTAAAA ACAAACGGTA CCGTTCATTT GACAGGCAAC CCCGGTGTAC TGCTCGGCGG AAGCATCCAT GCTGCAAAGG GTGTTTCGGT TCATGACTTG GGGGCCGAAA AAACCATAAG GACAATTATC TCGTTCGGAC AGGATTACTT GATAAAAGAT GAAATTGAAG TCCGTGAAAA AGAAATAGAA GATAATAATG CCGAGCTTGC AAAAATCGAA AAAGACTTGC AGGCAAATCC CCCTGATGTC GATGCCTTAA GACAGAAAAA GGTTAAGCTT TTAAAAAGAA ACAGTGCTCT TACGGTCCGC ATATTTAATC TAAAAGAAAA TTTTGAATTT CACATTCCTT CAAAAATAAA GGTTACAGGT TCGGTTTATC CGGGCGTTGT TCTTGAAAGC CACGGACGCT ATTTTGAAGT TATGGAAACT CATCATAACG TATTTTTTGA GTTCGATGAA AAAAACGGGC AAATTATATG TTCGCCTATT AAAGAAGTTG AAGTTGAATT AGAATAA
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Protein sequence | MEKAWTLKKN NSGKWFLTFT ALIESENCPS ADEIHLEAKR KGIKSSSLVS KKTIEDYLKK HTGSGIEPVS LPLELDPNFD ARITTNNDKT AAYLYVRKAA DSANEVDMST INRLLQRSNI ANIDTEKVKE GLSDFINSSE MEFSMQIAEG SPPKRGPDKK LITHFEQIPD HEVQRLADRL KRPDLRTPDV ENPTTDKDYP LSEAETLTVV EKGDLIYEVE DAGLGEAGVD VYGQSIPGLP GNDPFFLDLR NIVQNHSELR AGETGLLLIA NTERGLKIRI VPYRDAKVRA VISRDKMEVS LILQSGLGAG ERLSVIGVKT ALNEVNLLDS ISDAKINEII ESARKVNDEC EFVILSGTPP IAPGSYRLEW SIKFNEELST ATVEKDALIL TARLLPKGEK GKNVFGELID PKNAEPTDLP ANDETIKVTE EKHVIKFFAA ESGELSFFNN ALVISSLKTI QSDIDTKFGD ISFPGNLIIT GDIKDDVKVK SKGKLTITGT VEKALIYSED SLTLNGGING KGRGTVWAKD KTDLQYAENA RVFSGGDISI ASYCFKCLVK TNGTVHLTGN PGVLLGGSIH AAKGVSVHDL GAEKTIRTII SFGQDYLIKD EIEVREKEIE DNNAELAKIE KDLQANPPDV DALRQKKVKL LKRNSALTVR IFNLKENFEF HIPSKIKVTG SVYPGVVLES HGRYFEVMET HHNVFFEFDE KNGQIICSPI KEVEVELE
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