Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1369 |
Symbol | uvrB |
ID | 2741130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1409894 |
End bp | 1411882 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637160248 |
Product | excinuclease ABC subunit B |
Protein accession | NP_971975 |
Protein GI | 42526877 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGT TTAAACTTAT TTCGGATTAT AAACCTTCAG GTGATCAGGG AGAAGCTATC AAGGCTCTTT CAGACGGAAT AATTGCAGGC GACAAATTTC AAACGCTCAA AGGTGTTACG GGATCGGGAA AAACTTTTAC AATGGCAAAT ATTATTCAAG CCGTACAAAA GCCGACCCTA ATCATAAGCC ACAACAAAAC CCTTGCCGCT CAGCTTTACA GGGAATTTAA AACCTTTTTC CCTGAAAATG CCGTCGAATA CTTTGTTTCA TATTACGACT ACTATCAGCC TGAAGCCTAT GTTCCCGCAC GCGACCTTTA TATCGAAAAG GACGCTTCAA TAAATGACGA GATCGACCGC CTCCGCCTAT CGGCAACCTT CAGCCTTATG GAACGCCGAG ACGTAATCGT CGTTTCCACC GTTTCCTGTA TTTACGGTTT GGGGCTTCCC GAATCGTGGC GGGACTTACG CATAACCATA GAAAAAGGCG AAAACATCGA AATCGAAAAA TTAAAAAAAC AGTTGATAAG TTTGCAATAT GAAAGAAACG ATGCAGTCCT TGAAAGAGGC CGCTTCCGCG TCAAAGGTGA TGTTATGGAA ATTTTTCCGG CCTACATGGA AGATGCCTAC CGCCTTGAAT TCGATTGGGA AGAAATTGTG CGCATCAGAA AATTCAATCC GATTTCGGGT GAGGTAATAC AGGAATACGA AGAGCTTTCA ATTTATCCTG CAAAACACTT TGTGATGCCG GAAGATGCAA TTCCCAATGC TCTTGAAAGA ATAAAAAAAG AATTGGAAGA AAGGCTGAAT GTTTTAAATA AGGAAGGAAA GCTCCTTGAA GCAGAAAGGC TAAAAACCCG CACCGAATAC GATATCGAAA TGCTTTCCGA AATGGGTTAT TGCCCCGGCA TCGAAAATTA CTCGGCTCCA ATCGCAAACC GGAAACCCGG AGAGCCTCCC GCTACCCTCT TTCATTATTT TCCCGATGAC TTTTTATTGT TCATGGATGA AAGCCATGTA ACATTTCCTC AAGTGGGAGC CATGTATGAA GGAGACCGCA GCCGCAAACA AAATCTTGTA GACTTCGGTT TCCGTCTTCC TTGTGCCTTA GATAACCGCC CTTTAAAAAT CGACGAGTTT GAAAAGATGC TTAATCAGGC CGTTTTTGTT TCCGCAACCC CCGGCCCTAA AGAAATAAAA TACTCTACCC GCATTGTCGA ACAAGTAATA CGCCCTACAG GCCTTTTGGA TCCGATAATC GAGATTCATA AAAGCGAAGG CCAGATGGAG CATATCTACG GAGAGGTAAA AAAACGCATT GCCCTAAACG AACGCAGCCT AATTTTAACT CTTACAAAAA AGATGGCGGA AGACTTAACC GATTATCTTA CAGGGCTCGG TCTCAAAGTA AAATATATCC ACAGCGAAGT TGAAACGATT GAGCGTGTCG AAATTCTAAA GGGCTTGCGT GCAGGAGAAT TTGATGTGCT TATAGGAATC AACCTTTTAA GAGAAGGCAT CGACTTACCC GAGGTTTCTT TTATCGGAAT TCTCGATGCA GATAAGATAG GCTTTTTGCG TTCTACTACA AGTCTTATTC AGATTGTAGG ACGGGCAGCC AGAAACGAAA ACGGTAAGGT AGTTATGTAT GCCGACAGGA TAAGCGATGC TATGAAAGAA ACCATAGAAG AAACAAACCG CCGCCGTGCT ATTCAGGAAG CCTACAACAA GGAACACGGT ATAACACCCA AGACAATCAA AAAAGCAATT GAAGATATTT TAACACGGGA AAATGAAATA AAAAAAGAAG CGGCCCTTGC AGAAGCCGGC CCCCTTATCA ACAGCCTAAA CATTTTAAAC CCTGCCGACA GAAAAAAACT TATCAAAAAA CTTGAGGCCC AGATGGCCGA ATATGCCGAC ATGCTCATGT TTGAAGAAGC AGCAGTCATA AGAGACAAGA TAGAAGAAGT AAAGCGGATA GGAAGTTAA
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Protein sequence | MKQFKLISDY KPSGDQGEAI KALSDGIIAG DKFQTLKGVT GSGKTFTMAN IIQAVQKPTL IISHNKTLAA QLYREFKTFF PENAVEYFVS YYDYYQPEAY VPARDLYIEK DASINDEIDR LRLSATFSLM ERRDVIVVST VSCIYGLGLP ESWRDLRITI EKGENIEIEK LKKQLISLQY ERNDAVLERG RFRVKGDVME IFPAYMEDAY RLEFDWEEIV RIRKFNPISG EVIQEYEELS IYPAKHFVMP EDAIPNALER IKKELEERLN VLNKEGKLLE AERLKTRTEY DIEMLSEMGY CPGIENYSAP IANRKPGEPP ATLFHYFPDD FLLFMDESHV TFPQVGAMYE GDRSRKQNLV DFGFRLPCAL DNRPLKIDEF EKMLNQAVFV SATPGPKEIK YSTRIVEQVI RPTGLLDPII EIHKSEGQME HIYGEVKKRI ALNERSLILT LTKKMAEDLT DYLTGLGLKV KYIHSEVETI ERVEILKGLR AGEFDVLIGI NLLREGIDLP EVSFIGILDA DKIGFLRSTT SLIQIVGRAA RNENGKVVMY ADRISDAMKE TIEETNRRRA IQEAYNKEHG ITPKTIKKAI EDILTRENEI KKEAALAEAG PLINSLNILN PADRKKLIKK LEAQMAEYAD MLMFEEAAVI RDKIEEVKRI GS
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