Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1364 |
Symbol | valS |
ID | 2739465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1404903 |
End bp | 1407632 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637160243 |
Product | valyl-tRNA synthetase |
Protein accession | NP_971970 |
Protein GI | 42526872 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA AATTGCAGGC GATTGAATTG GAAAAATCTT ATAATCCTAA AGAATTTGAA GAGCGTATTT ATTCCTTTTG GGAAGCCAAT AAGTGCTTTA GCCCGATAAA AAAGAAAAAC ACAAAAAATA CATTTACTGT CGTCATTCCT CCGCCCAATG TTACGGGCGT TCTCCATGTA GGCCATGCCC TTGATGAAAC CTTGCAGGAT GTAATTGTCC GTTACCACCG TATGAAAGGG GACGAAACCC TTTGGATTCC CGGAACCGAT CATGCAGGTA TTGCCACGCA ATCCGTTGTA GAAAAAAAAC TGAAGGCCGA AGGCAAAAAC CGCCGCGACC TCGGACGGGA AGCTTTTATC GAAAAGGTAT GGGAAGTTAA AAATGAACAT CACTCGATTA TAACAAAGCA GCTCCGCAAA ATGGGAGTTT CGGTTGATTG GGATAGGGAA CGCTTTACCT TAGATGAAGG GCTTTCTCAG GCTGTAAGAG AGGTCTTTGT TTCTTTATAT GAACAGGGGC TAATCTATCA GGGAAATTAC CTTGTAAACT GGTGCCCTTC ATGCGGTACC GCAATTTCCG ATGATGAGGT CGAACATGAA GACCGAAAGG GCGGCATGTA CCATATTTAT TATAAATTGG CAGACGGGGC AGTTTTACAA AATGAAGCCG GCGAGAAAAT ACAAGAAATA GAAATTGCAA CCACCCGCCC TGAAACCCTT TTGGGCGATA CCGCCATAGC CGTTCATCCC GAAGACCCCC GCTATGCTTC CATCATAGGA AAGGAAGTAA TTCTCCCTCT CGCAAATAGG AAAATTCCTG TAATTGCCGA TTCCTATGTC GATAAAGAAT TCGGAACGGG GGTTGTAAAG ATAACTCCTG CCCATGACCC CAATGACTGG GAGGTAGGTA AAAGGCATAA TCTTCCCGTT CTAAATATCT TAAACCCCGA CGGAACATTA AACGATGCCG TTCCCGAAAA ATACCGAGGC CTTTCAACGG AAAAAGCACG CAAGGCCGTT ATCGAAGATT TGGAAGAACT GGGCCTTTTT AAAAATGAAG AAAAAATAAA ACACGCAGTA GGCTGCTGTT ACCGATGTCA TACAAGTATA GAGCCCTATG TTTCAAAACA ATGGTTTGTA AAAATGCAGC CCTTGGCTCA AAAAGCCTTA GATGCATGGA AAAAAGGCGA TGTTGTTTTT TATCCTCAAA AATGGGAAAA CACCTATGCT CACTGGATGA ATAATATTCG CGACTGGTGT ATTTCCCGTC AGCTTTGGTG GGGGCATCGT ATTCCTGTTT GGTATTGCGC CGATTGCGGA AAAACTATCG TAAGCCGTAC GGATATTACG GAATGTCCTC ACTGTAAATC AAAAAACATA AAGCAGGATG AGGATGTTTT AGACACTTGG TTTTCAAGCT GGCTTTGGCC TTTTTCAACC CTCGGCTGGC CCGAAAAGAC CGAAGACCTC GCACGCTTTT TTCCGACATC GGCCCTTGTT ACAGGACACG ATATAATTTT CTTTTGGGTA GCAAGAATGA TAATGGCCTC CTTGCAGTTT ACGGGCAAGG CTCCTTTTAA AGATATTTTT ATTCACGGTT TGGTTCGGGA TAAACAAGGC CGCAAGATGA GTAAGAGCTT GGGAAACGGT ATTGACCCCC TTGTAGCCAT CGAAGAGTTT GGGGCTGACG CTATGAAGTT CACCCTTACC TTTATGTGCG GTTCTCAAAG TCAAGACTTC TTAATCGACA TGGAAAGTTT TAAGCTCGGC TCAAAATTTG CAAACAAGGT TTGGAACGCT TCCCGATATA TTTTAGGAAA TCTTGCAGGC AGAACCATTG TGCCTGTCGG ACGGGACGGC AGTCTAAACA GCTTAAAAGA ACTTGACCGC TGGATTTATC ATGAACTAAA CGAGGCGGCT CAAACGGTTC GCTCAAGCCT CGATTCTTAC CGTTATAATG AGGCCGCTCA AAAGGTTTAC GAATTCTTTT GGAATAATTT TTGTGATTGG TATGTTGAAG GTACTAAACT TTCTTTTAAG TACGGAGACG AAAAAGAGAA GGATAGGGCG GCTTCGGTGC TCCTTGCCGT TTTGGAAGAA TCCTTACGCC TGCTTCATCC GTTTTTAGCC TTTGTTACCG AAGAGATTTA TTCAAAGCTG CCCGGTAATT GTGCTGAAGG CGCCTTGCCC CGTGCCAAGA TTTTAATGAC TTCCGATTAC CCCGAAGAAA AAAAAGAACG CATAGATGAG GCTGCTTCTA TCCGTTTTAG GACCTTGCAG GAAATTGTCC GCAACATTAG AGCCTTACGG GCCGAATGCG GCATAGACCC TCAGTTAAAG CTTAAGGTTT CTCTTTATAT CGAGAAAAAC TCTCCTGCGG AAGCTGCCCG TGAAAATTCC GAAATAATAG AAATGCTTTC AGGCCTTTCC GGTTTAGACT TTATCGATTC TCTTAAAGAA AAACCTGCCT CTTCAATCGG TGTAGTAGGA GCGGGTTTTG AGGCTTTTTT GATAACGGGA GATTCAATAG ATATCGATCA ATTAAAAAAG CGTTTTGAAA AAGAGCTTGA AAAAAATGAA CAAAATGCTT CAAAGATAGA TTCTAAGCTC AAAAACGAAA ACTTCGTTAA AAACGCTCCT CCCGAAGTCA TCGAAGGCGA AAAAGAAAAA CACGCCGAGT TTTTAAGGCG TATCGAAAAA CTAAAAGGTT ATTTGGAAGG GATGAGGTAG
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Protein sequence | MSEKLQAIEL EKSYNPKEFE ERIYSFWEAN KCFSPIKKKN TKNTFTVVIP PPNVTGVLHV GHALDETLQD VIVRYHRMKG DETLWIPGTD HAGIATQSVV EKKLKAEGKN RRDLGREAFI EKVWEVKNEH HSIITKQLRK MGVSVDWDRE RFTLDEGLSQ AVREVFVSLY EQGLIYQGNY LVNWCPSCGT AISDDEVEHE DRKGGMYHIY YKLADGAVLQ NEAGEKIQEI EIATTRPETL LGDTAIAVHP EDPRYASIIG KEVILPLANR KIPVIADSYV DKEFGTGVVK ITPAHDPNDW EVGKRHNLPV LNILNPDGTL NDAVPEKYRG LSTEKARKAV IEDLEELGLF KNEEKIKHAV GCCYRCHTSI EPYVSKQWFV KMQPLAQKAL DAWKKGDVVF YPQKWENTYA HWMNNIRDWC ISRQLWWGHR IPVWYCADCG KTIVSRTDIT ECPHCKSKNI KQDEDVLDTW FSSWLWPFST LGWPEKTEDL ARFFPTSALV TGHDIIFFWV ARMIMASLQF TGKAPFKDIF IHGLVRDKQG RKMSKSLGNG IDPLVAIEEF GADAMKFTLT FMCGSQSQDF LIDMESFKLG SKFANKVWNA SRYILGNLAG RTIVPVGRDG SLNSLKELDR WIYHELNEAA QTVRSSLDSY RYNEAAQKVY EFFWNNFCDW YVEGTKLSFK YGDEKEKDRA ASVLLAVLEE SLRLLHPFLA FVTEEIYSKL PGNCAEGALP RAKILMTSDY PEEKKERIDE AASIRFRTLQ EIVRNIRALR AECGIDPQLK LKVSLYIEKN SPAEAARENS EIIEMLSGLS GLDFIDSLKE KPASSIGVVG AGFEAFLITG DSIDIDQLKK RFEKELEKNE QNASKIDSKL KNENFVKNAP PEVIEGEKEK HAEFLRRIEK LKGYLEGMR
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