| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1274 |
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| Symbol | |
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| ID | 2740567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1308733 |
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| End bp | 1309650 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637160152 |
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| Product | oligopeptide/dipeptide ABC transporter, permease protein |
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| Protein accession | NP_971881 |
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| Protein GI | 42526783 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000176481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAACA ATATGACAGA AGACAAAACA TATTTTTCAG AAAATGTATC TGAAGAAAAA
AAGAACACTT ATTTTAATGA AGTTGTAGAA AAATTATTAA ATAATAAATT GGCAATGGCT
GGGTTAATAT TTTTTTTACT TCTATCGCTT TTAGTAATTA TTTTACCTTT TATTTTAAAT
TTAGATCCGT ATACATCAGA TCCGGCGGCA TTTAATTCTG CACCAACTCG TTCACATATT
CTTGGTACCG ATGCCATAGG AAGAGATTTG TTTGCAAGAT TAATATACGG GGGCCGTACA
TCATTGATGG TCGGAGTTGT ATCGACCTTC ATATCCCTTA GCATAGGAGT TCCTTTAGGA
TTAATTGCGG GCTATTATAA AAAAATCTGG GAAGTATTTA TCATGAGGTT GGGAGATATA
TTTTTATCCT TTCCTTCAAT AATTTTAATT TTAGTATTAG TTTCCGTGAT AGGACCGTCA
ATATGGTCTG TTACCATTGT ATTGGGTGTT TTGCAATGGA CTGTATTTGC TCGATTAATA
TATGCAAATG TACTGAGTAT AAAGGAAAAG GAATATATTG AAGCTGCAAA ATCAATAGGT
ACGTCAAATT TTTCAATTAT TTTAAAATAT ATTTTACCAA ATGCTTTTCC CCCAATTTTA
ATAACCGTTA CATTTAATGT TGCAAGAGCA ATTTTAAGTG AGTCGGCTTT AAGTTTCCTT
GGAATGGGTG TTCAACCGCC AAAAGCAAGT TGGGGTAATA TGCTGTATGA TGCACAATCT
ATTACCGTCC TATCCAGATA TTACTGGGTA TGGCTTCCTC CCGGCTTGTG CATTGTACTT
ACAGTACTAA GTATCAATTT CTTTGGAGAT GGAATTAGGG ACGCTCTGGA TCCGCGTTTA
AAGATCCAAG TAAAATAA
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| Protein sequence | MENNMTEDKT YFSENVSEEK KNTYFNEVVE KLLNNKLAMA GLIFFLLLSL LVIILPFILN
LDPYTSDPAA FNSAPTRSHI LGTDAIGRDL FARLIYGGRT SLMVGVVSTF ISLSIGVPLG
LIAGYYKKIW EVFIMRLGDI FLSFPSIILI LVLVSVIGPS IWSVTIVLGV LQWTVFARLI
YANVLSIKEK EYIEAAKSIG TSNFSIILKY ILPNAFPPIL ITVTFNVARA ILSESALSFL
GMGVQPPKAS WGNMLYDAQS ITVLSRYYWV WLPPGLCIVL TVLSINFFGD GIRDALDPRL
KIQVK
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