| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1227 |
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| Symbol | |
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| ID | 2741169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1260653 |
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| End bp | 1261987 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637160105 |
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| Product | hypothetical protein |
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| Protein accession | NP_971834 |
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| Protein GI | 42526736 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.297212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAAGC TTTATAAAAC AAGCAAAATA AGGTTTATGA GACTTTCTAT TTATTCTTCA
TTTTTTATGA AAAAGTTTTT GTGTATATTT TGCTTTTTTC TTTCCGTCTT GTTGTGTTTT
GCAGATTTTG CTTTTGACCT TAATCTTCAG CCGTATAAAA ATGCGGAATT TTTTGCTGAC
GGCCTTAAAG TTGAATCTAA ACTTATATCT TCCGATAAGA CTCTGGGGCA TTTGAGTTTT
ACTCTAAATG ATACGACAAC TTCACTTGTG ATAAAAAAAG AAGGCTTCCG TACTCATAGT
TTGGATTTAA CATCGATAGA AAATAAAAAA GCCTTTGTTG TTCTTTCTCC CATAGATTCA
AAATACGATG TAGTTAAAGT TTTTCCCACG GGAAGGAAAC CTAAGAGCGT TACCTTCGTA
AACGATAAAG CCGTTGCTGT AGCCCTTCTT GACGGTTCGG GGTTTGATTT GATAGATATT
GAAACCGGAG AGACGAAGCG GATTTCTCCT CCAAAAGAAT ATGCCGAAAA ATTCGGCTTT
GTAGAATCTC TCGTGCTAAA ACATAAAAAC GAATTATGGG TCAGCCAAAT GCCTACGGCC
TCAATTCATA TCTTTGATCT TACGTCTTTT GAGTATAAAA GAACTATAAA CTCTACAGGT
ACATGGAGCA AGGTAATGGC TTATAATGCC GGCCTTGATA AGGTCTATTT GAGTAATTGG
ACCTCACAGG ACATAAGCGT TATCGATCCT TCTTCTTATA AAGAAGAAAA AAAGATAAAG
ACTAAGGCTG TTCCGAGAGG TATGGCATTT TCTCAGGACG GAAAATTTAT CTACTGTGCA
CAATTTGAAG ATTCGGCCGG TAATTCTCAA TGTAAACTTA TAAAAAAATC CTTAGCCGAT
TATAAAACCG TTTACGAGGG CGGGGTAAAG GGGGCAAAGC GGCACATTGT TACCGACTAT
GAGCGTAAGC TAATCTACGT TTCGGATATG AGAAATGATA TTGTTGAAGC TTATTCTACG
GATAAGGATG AGCTTGTTGC AAGTATCAAG GTGTTTTTTA ATCCGAATAC TATTCAGCTT
TCGCCTGATA AAAGCCTTCT CTATGTTTCA TGCAGGGGGC CGAATAATCC CGATAAGGGA
TATTTGTATA AGGGTTATGT TTTCGGCCGT CTAGATATAA TCGATACAAA AACATTTACC
CGTATTGAAA GCATTGAAGC CGGTAATCAG CCTACAGGCT TGGATGTTTC TCCCGACGGA
AAAAAAATAG TTCTATCCGA TTTTTTGGAT AATAGAATAC GGGTGTACGA ACTAAAGTCT
TCACTACTTG AATAG
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| Protein sequence | MTKLYKTSKI RFMRLSIYSS FFMKKFLCIF CFFLSVLLCF ADFAFDLNLQ PYKNAEFFAD
GLKVESKLIS SDKTLGHLSF TLNDTTTSLV IKKEGFRTHS LDLTSIENKK AFVVLSPIDS
KYDVVKVFPT GRKPKSVTFV NDKAVAVALL DGSGFDLIDI ETGETKRISP PKEYAEKFGF
VESLVLKHKN ELWVSQMPTA SIHIFDLTSF EYKRTINSTG TWSKVMAYNA GLDKVYLSNW
TSQDISVIDP SSYKEEKKIK TKAVPRGMAF SQDGKFIYCA QFEDSAGNSQ CKLIKKSLAD
YKTVYEGGVK GAKRHIVTDY ERKLIYVSDM RNDIVEAYST DKDELVASIK VFFNPNTIQL
SPDKSLLYVS CRGPNNPDKG YLYKGYVFGR LDIIDTKTFT RIESIEAGNQ PTGLDVSPDG
KKIVLSDFLD NRIRVYELKS SLLE
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