| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1195 |
|---|
| Symbol | |
|---|
| ID | 2741156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1227724 |
|---|
| End bp | 1229781 |
|---|
| Gene Length | 2058 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637160073 |
|---|
| Product | prolyl endopeptidase |
|---|
| Protein accession | NP_971802 |
|---|
| Protein GI | 42526704 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00494828 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATA AAAAATCGGA TGTTTCCGAC AATTATTTTG GAACCATCGT GCCTGATCCG
TACCGATGGC TTGAAGACGA TAATGCACCC GAAGTCATAG CTTGGGTTAA AGAAGAAAAT
AAAAAAACCG AAGATTTTTT ATCCAAAATC TCTTTCAGAG GAGAGCTAAA AAAACGGCTT
GAAGAAATTT GGGATTATGA AAAACGTTCA GGTCTTTTTA AGGCAGGAAA TTTCTATTAT
TTTTTTAGAA CGGAAGGCTT ACAAAATCAA AGCATTATGT GCCGCCAAAG CGGAAACATA
AAGGCGGAAA GCTCTCCTGA AGTCTTTTTT GATCCGAATA AGCTAAGCGC GGACGGAACT
ACGGCCTTAA AAAATCTTGC CTTTTCCAAG GATGGAAAAT ACATGGCCTA CTCCGTATCG
GGAAGCGGCT CCGACTGGGA AGAAATCTTT GTCTTTGATG CCGAAAAAAA AGCCGATACG
GGAGAACACA TCCACTGGGT AAAATTTTCC AATATTGCAT GGTATAAGGA CGGTTTTTTT
TACAGCTCAT ACGATACTCC CGATAAAGGA AAATCTTTAA CCGAAAAAAA CGAATTCCAA
AAGTTAAAAT ACCATAAACT TGGAACAAAA GAAAGCGATG ACCTTCTCAT TTTTGAGGAC
AAGGATCATC CCCTGCGCTC TTTTTCTGCA AGTACAACTG AAGACGAGAA AACCCTCCTT
CTTACCGCTT TTGAAGTAGG AAGTGAGGGC AATATGCTCT TTGTTGCGGA TCTAAGCGAA
GGTCTTCCGA AATGTTCACA CTGCTTTAAA CAATACAACA CTCATTTTAA TGACAGTGTC
TGGCCCCTTG AAACCGAAAA CGGCTTTTTA TATTTATTAA CAAATAAACA AGCTCCATTT
TACCGAGTTG TAAAGACATC TTTAAACAAT ATAAGTGAAA AGTCCATCGA TGAAGTAATC
CCTCAAAAAG ACTGCCTTTT ATCAAGCGCG GCCCTTTGCG GAGGAAAACT TCTTACGGTT
TACTTGAGGG ATGTTCAGGA TGAGGCCTTT ATCTGCGGCC TTGACGGAAA AAATAGCACA
AAAATAAATC TGCCTGCAAA TGGAAGTATT TCTTTTTCAG GAACACGAAA AAATGAAGAC
TCTTTATTTT TCAATTTTAC CTCTTATACA ACTCCCAACA AAATCATACG CTATGATATA
AAAACAAACA GTTTAACCGA CTTTTTTGTT CCTGCCATTC CAATCAACAC AGGAGATTTT
AAATGCGAAC AGGTCTTTTT TAAGAGCAAG GACGGAACAA AAATTCCTAT GCACATTGTT
TCAAAAAAAG ATATTAAACT CGATGGAAGT AACCCTACGA TTATGTATGG GTACGGAGGC
TTTGCTATTT CTCTTCCACC TGCCTTTTCT GCAGCCAGAA TGGCCTTTTT GGAAAAAGGA
GGCATCTTTG CCTGCGTAAA TTTACGCGGC GGCCTTGAAT ACGGAGAAGC ATGGCACTCG
GCAGGAAAAA AGATGAAAAA ACAAAACGTC TTCGACGATT TTATTGCAGC CGGAGAATAT
TTGATAGAAC ACAAATATAC TTCAAGCAAA AAACTTGCAA TTCAAGGAGG CTCAAACGGA
GGCCTTTTAA TAGGAGCCGT AACAAACCAA CGCCCCGATC TTTTTGCCGT TGCAATCCCT
CAGGTTGGAG TCTTGGACAT GCTCCGCTAC CAGCATTTTA CCATAGGCTG GGCTTGGGTC
GATGAATACG GAAGCAGCGA GGACAGTAAG GAGATGTTTG AATATCTTTA TGCTTACTCG
CCCCTCCATA ACGTAAAAGA AGGAGTCAAT TATCCTTCCA TTATGGTATG TACGGGAGAC
CATGATGACA GGGTTGTTCC TGCACACTCC TTTAAGTATG CTCAAGCCTT GCACGATACT
TACAAGGGAG AAAACCCTAT CCTCATCCGT ATAACCGAAA AAGCGGGCCA CGGAGCCGGC
AAACCCACTG CAAAGATAAT AGAAGAAACG GCGGATATCT ACGCCTTTAT CTTTAAGCAA
ACCGGTCATA TAATCTAA
|
|---|
| Protein sequence | MQYKKSDVSD NYFGTIVPDP YRWLEDDNAP EVIAWVKEEN KKTEDFLSKI SFRGELKKRL
EEIWDYEKRS GLFKAGNFYY FFRTEGLQNQ SIMCRQSGNI KAESSPEVFF DPNKLSADGT
TALKNLAFSK DGKYMAYSVS GSGSDWEEIF VFDAEKKADT GEHIHWVKFS NIAWYKDGFF
YSSYDTPDKG KSLTEKNEFQ KLKYHKLGTK ESDDLLIFED KDHPLRSFSA STTEDEKTLL
LTAFEVGSEG NMLFVADLSE GLPKCSHCFK QYNTHFNDSV WPLETENGFL YLLTNKQAPF
YRVVKTSLNN ISEKSIDEVI PQKDCLLSSA ALCGGKLLTV YLRDVQDEAF ICGLDGKNST
KINLPANGSI SFSGTRKNED SLFFNFTSYT TPNKIIRYDI KTNSLTDFFV PAIPINTGDF
KCEQVFFKSK DGTKIPMHIV SKKDIKLDGS NPTIMYGYGG FAISLPPAFS AARMAFLEKG
GIFACVNLRG GLEYGEAWHS AGKKMKKQNV FDDFIAAGEY LIEHKYTSSK KLAIQGGSNG
GLLIGAVTNQ RPDLFAVAIP QVGVLDMLRY QHFTIGWAWV DEYGSSEDSK EMFEYLYAYS
PLHNVKEGVN YPSIMVCTGD HDDRVVPAHS FKYAQALHDT YKGENPILIR ITEKAGHGAG
KPTAKIIEET ADIYAFIFKQ TGHII
|
|---|
| |