Gene TDE1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1181 
Symbol 
ID2740078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1210032 
End bp1210598 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content33% 
IMG OID637160056 
Productmethyltransferase domain-containing protein 
Protein accessionNP_971789 
Protein GI42526691 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000075039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GTGTTCGGTT TTTATCTAAA AAAAGTTCCG AATACATAGG AGAAGTTTTA 
CTTTTTAGGA AAAAACTATC CGCCCTTGTA AACATAAAAG AACTTATAGA TTCTAATCAA
GAAAAAAATA CTGAAAAGTT CTCTCAAAAT AAGTTTTTTG ATTTTGCGGA AATGGCACAA
ATTAATATCC AAGAAATTCT AACTTTTAGA AAACAAACCT TGCTGGCCGC CGTAAACTCA
TCATGTAAAA AGGGACCTAA AAACGTACTT GACCTTGGCG GAGGAGCCGG TGTCATGCTC
GGTGCAATTG CGAAGCAATA CCCCTGTGCT TCCTATACCT TATTTGAAAG GCCCGTTGTT
GCAAAAATTG CCTATGATTA CATAAAACAG ATTTCCTTAA AAAATACGGT TAAAATAATA
GAAGGCGATT TTCTAAAAGA CGACATACGG AATGATTACG ATTTAATAAT CGCTTCCGGC
ATCTTTCCTT TTCGGAATCT TATAAAAAAA GAAGATTGCG AAAAGGATAA AAAAATTATG
TTGACGGTTT TCTATACCTT ATTTTAA
 
Protein sequence
MKKSVRFLSK KSSEYIGEVL LFRKKLSALV NIKELIDSNQ EKNTEKFSQN KFFDFAEMAQ 
INIQEILTFR KQTLLAAVNS SCKKGPKNVL DLGGGAGVML GAIAKQYPCA SYTLFERPVV
AKIAYDYIKQ ISLKNTVKII EGDFLKDDIR NDYDLIIASG IFPFRNLIKK EDCEKDKKIM
LTVFYTLF