| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1179 |
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| Symbol | |
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| ID | 2740076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1208019 |
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| End bp | 1208996 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637160054 |
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| Product | iron compound ABC transporter, permease protein |
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| Protein accession | NP_971787 |
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| Protein GI | 42526689 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00674105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAG CAGGTGTTTT TATTGTTTTA TCTCTATTAC TTATAGTTTT GTTTTTTTCA
TCTGTTGCAT CGGGTTCGCT CAAATTTTCA TTTGCACAAA TTTGGGCGGC CCTGTGCGGC
AGAGGGGAGC AGCTCGTTAC CGATGTAATC TTTGATTTAA GGCTTCCGCG TGTCCTTGTT
GCCCTTGTCG TCGGAATGAA TCTTGCATCT GCCGGAGCTT TGATGCAGGC GGTTATGCAA
AATCCCTTGG CGGATCCCGG TATTATCGGC GTTTCTGCAG GAGCCAGTGT CGCCGGGGTT
ATATTGATGC TCGCTCTTCC TCAGTATGCA TACTTGGTAC CGCCTGCGGC TTTTGTCGGG
GCGATATTTG CAGCCTTTTT AATATATCTT TTAGCATGGA AAGACGGGTT TACTCCCGTA
CGAATTATTC TATCGGGAGT TGCAATCAAT GCTCTTTTGG GAAGCCTTAC CGGTTTGGTT
ACCATTTTAT TTAGCGACAG GCTTCAGGGT GCGTTGATGT GGCTTAACGG AAGTTTGTCA
GGAAAAACGT GGCGGCATTT TCAAGTGCTT ATTGTATACA GTATTCCGGC CCTGATACTT
GCTCTTCTTT GTATTAGGGC AGCGAATGTC TTATTGCTGG GAGATGAAAA AGCAAAAAGT
CTTGGGGTAA GTGTCAACCG CTGCCGTGTA TTTCTTTCGA TTATCGGGGC TTTTTTGGCA
GGGATATCGA CTTCGACTGT CGGAATCATC GGTTTTATAG GTTTGGTTAT CCCCCATATC
ATGAGGATGC TGGTCGGGTC GGATTATAAG AGTCTATTAC CGTTTTCAAT GTTCAGCGGA
GCAGTTTTGC TGCTCGGAGC GGATACTTTT GCCCGTACTA TTGCTTCACC GATTGAATTG
CCTGTAGGAA TTGTAATGTC GATATTCGGA GCACCGTTTT TTCTGTACCT TTTGAGAAGT
TCCGGTAAAA GGAAATAG
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| Protein sequence | MKKAGVFIVL SLLLIVLFFS SVASGSLKFS FAQIWAALCG RGEQLVTDVI FDLRLPRVLV
ALVVGMNLAS AGALMQAVMQ NPLADPGIIG VSAGASVAGV ILMLALPQYA YLVPPAAFVG
AIFAAFLIYL LAWKDGFTPV RIILSGVAIN ALLGSLTGLV TILFSDRLQG ALMWLNGSLS
GKTWRHFQVL IVYSIPALIL ALLCIRAANV LLLGDEKAKS LGVSVNRCRV FLSIIGAFLA
GISTSTVGII GFIGLVIPHI MRMLVGSDYK SLLPFSMFSG AVLLLGADTF ARTIASPIEL
PVGIVMSIFG APFFLYLLRS SGKRK
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