| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1171 |
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| Symbol | |
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| ID | 2740068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1200315 |
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| End bp | 1201118 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637160045 |
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| Product | hypothetical protein |
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| Protein accession | NP_971779 |
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| Protein GI | 42526681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.786913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTTTTTTG TTTAATATTG TTTATGATAG CTCTTTTATG CTTTGCAGAT
AAAAAATTTG AAAAGGTAAA AGCAGCTGCC GAACAGGGAG ATGCATTCGC TCAGTTTAAT
CTTGCTGCTA TGTATGATAA AGGGGACGAA TCTCTTGTCG ATAAAAAACA AGCTGTTTAT
TGGTATACAA AAGCTGCCGA ACAGGGATAT GATGTAGCTC AGCTTTTTCT TGCTTTTATG
TATGATATAG GTGATGGAAT TCCTATTGAC AAAAAACAGG CTTTTTATTG GTATACAAAA
GCCGCAGAAC AGGGAAATGT AGCAGCACAG TGTATTCTTG GTCTAATGTA TTCTAATGGA
GATGGGACCC CGGTAGATAA AAAACAAGCT TTTTATTGGT TCAAAAAAGC TGCCGAACAG
GGATATGCAA AAGCACAGTT TAATCTTGGT GGTATGTATT ACAAAGGCAA TGGAATACTG
ACTGATAAAA AACAAGCTTT TTATTGGTTC AAAAAAGCTG CCGAACAGGG ATATGCAGAA
GCACAGTTTA ATCTTGCTCT TATGTATTAT AATGGAGATG GAATACTGGC TGACAAAAAA
CAAGCTTTTT ATTGGTACAC TAAATCTGCC GAAAAAGGAC TCGCATTCGC CCAGTTTAAT
CTTGGTCTAA TGTATTCTAA TGGAGATGGA ATACTGGCTG ACAAAAAACA AGCTGCATAT
TGGATAAAGC AAGCCTATGA GAATGGTTAT GAGCCGGCAA AAGAACTCTG GGATGCAGAC
GAACTTTGGA AATATCAGGA TTAA
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| Protein sequence | MKKIFFCLIL FMIALLCFAD KKFEKVKAAA EQGDAFAQFN LAAMYDKGDE SLVDKKQAVY
WYTKAAEQGY DVAQLFLAFM YDIGDGIPID KKQAFYWYTK AAEQGNVAAQ CILGLMYSNG
DGTPVDKKQA FYWFKKAAEQ GYAKAQFNLG GMYYKGNGIL TDKKQAFYWF KKAAEQGYAE
AQFNLALMYY NGDGILADKK QAFYWYTKSA EKGLAFAQFN LGLMYSNGDG ILADKKQAAY
WIKQAYENGY EPAKELWDAD ELWKYQD
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