Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1124 |
Symbol | |
ID | 2739540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1155586 |
End bp | 1156263 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637159998 |
Product | hypothetical protein |
Protein accession | NP_971732 |
Protein GI | 42526634 |
COG category | [R] General function prediction only |
COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTCTATGTAT TTCGGATCAG ATAGACCCTG TGATTTACAG TAAAGACATA AAAGAAAAAT ATGGAGATGT AGATTTTATA ATATCGGCGG GAGACCTTCC GATAGACTAC CTTGACTTTG TACAAAATTC CTTAAATAAA CCGCTTTATT TTGTTTTCGG AAGCCACCAC TTAAAAGCTC TTACTCACTA TCATCCCGAA ATGGCTGAAA AAACAAAGGA TGGAGAGGTA AATATATTTA AAAAGGGAAA TACAAAAAAA AGCAATCAGG GAACCTATAT AGGGTTTAAA AGCCTTAAGT ATGAAAACAT TATAATAGCC GGCGTTTCAG GTGCTAAAAA GCACAATGAC GGTAAAAATC AGTTTACAGA AAAACAAATG AAGCGAAAGC TTTCAAAAAT GATTCCGGCA TTATTTTTAA ATAAGCTGAG ATACGGGCGC TATTTGGATA TCTTAGTAAC CCACTGTCCT CCATTGATTG AAGGTGAAAA AGAAGAAAAC AAACAAGAAG CTTTTGAGTG TTTTACCAAA TTTATAAATT TTTTTAAACC TAAATATCTT ATACACGGAC AAGTCCACAT ATATGACCCT CAACAATGCC GAAGCATAAG ACATGGAGAA ACCGAAATAA TTAACGCATA CAGCAGACAC ATTTTGGAGA TAACTTAA
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Protein sequence | MKKILCISDQ IDPVIYSKDI KEKYGDVDFI ISAGDLPIDY LDFVQNSLNK PLYFVFGSHH LKALTHYHPE MAEKTKDGEV NIFKKGNTKK SNQGTYIGFK SLKYENIIIA GVSGAKKHND GKNQFTEKQM KRKLSKMIPA LFLNKLRYGR YLDILVTHCP PLIEGEKEEN KQEAFECFTK FINFFKPKYL IHGQVHIYDP QQCRSIRHGE TEIINAYSRH ILEIT
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