| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1054 |
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| Symbol | |
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| ID | 2741328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1080980 |
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| End bp | 1083058 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637159927 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_971662 |
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| Protein GI | 42526564 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00043245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GGACATCTGT AAATTTATTT TTGACGCTTA CCTTGGTTAT TGTCGTATTT
GGAGCTTTAA CTTCAACCAT TTATTATATA CGATCATTTA TAGAGGATGT TTTTTATAAA
AACATTCATT ATATTTTGGA CTCTTCCTTT TCGGAGCTGC AAAGAGATAT TGAAAGCGGT
TTAACTATTT CAAGAAATTT TGCAAGGCAG AACAATTTAA TAAGATGGTT CGAATCTTAT
GAAGAGGATG GAAAAGACGG GGAAGATATT AAAGCCATGA TGTTAAAGTT GGCAAGCGAT
GAAAAGTTCA GTACCTGTTT TGCCGCTTCC GGATTGACCG GTTCTTATTA TGTAGTTAAA
GATAAAAAGA TTGTGCGGGA TAAATTATCT GAAAATAACG CGGTCGATTC ATGGTTTTAT
GATATTTTAA ATAAAAAAGA CGAGATCTTT TATAGCATTG ACTACAATAA AACTTTAGGA
ACCGTAAATT TTTGGTTCGA TTATAAAGTT GCTAATAATA AAGGCGAAGT CTTAGGGCTT
GCAGGCGTGG CCGTTAATTT GGATAAGGCT GTAGAAAAAA TGAAACAATC CATGCCCAGT
GATAATTCCT GGCTGAGTTT TATTGGAAAG GATGATGATG TTATAATATC CTCAAATTCC
GAGTTAATCG GAAAAAAAAT AGAACTTATT ACGGGCAGCC TTATTCCTGT GGAAGGTGTC
TCCGGGCTTT ATTATTGCAC GGATAAAGAT TTAGGTAAGG CCATTATTGC AAAAAAACAA
TTAAAAAATT TACCCTATTC AATTATGCTT TTTGCTCCTA TGAGTGATTT TGTTCCATCT
ATACTTTTAA TTTTACGCCT GCCTATTATT TGGTCATTTG GTATTTTTCT TATTGTGCTA
TTGCTCAGCT CCTTTTTATT AAGACTCTCT TTTGCCCGTT TCGCTAAAAT GAATTCCGTA
TTTAATAAAA TAGCTGAAGG AGATTTTAGC ATAAGGGCTG ATGTTTCAAA TGATGAAGTT
GGAAGTATAA CCTCGGTTTT AAATAACGCA ATAGAGAAGG TTAGTGCTTC CTTGGCAAAT
ATTGGGAAGC ATACCGACAA GATGCAGGGG ATGTGCGAAA ATTTATCTGC CAATATGGTA
GAATCCGCTG CCGCCTTAAA TGAGATTACG GCAAATATTG ATGGAGTTAG AGGGCAGGTT
CTCACTCAAA ACTCCAGTGT AGAAAATGCG GTCAGCAAGG TGGATGAAAT ATCCAGAGGT
ATTTCAGAGC TTGATGTTCA TATTGACAAT CAAACTGAAA GTTTTATGTC TTCTACAAAG
GCTGTAGTAG AAATAGTTTC AAATATTGAA GGTGTAAGAG GAAGGGCGCA AGATAATTTA
AAAGCCATTA AAGAACTTGA ACAGACAACT CACCAAGGAA AAGAAACCGT AAAATCCGTC
GTAGATATTA CCAGGATCGT AACCGAGCAA TCTGATGGAC TTTTGGATGC AATTTCCGTT
ATACAAAATA CGGCAAGTCA GACAAACCTT CTTGCAATGA ATGCTGCAAT TGAAGCTGCT
CATGCCGGAG AAGCCGGAAA GGGTTTTGCC GTTGTTGCCG ATGAGATCAG AAAGCTTGCC
GAAGAATCCG GAGAGCAGGG TAAAAATATT ACAAAGGTTT TGGAAGAATT AAAAAGCAAG
ATCGAAAATC TAAACGGTGT CGGACCCCGT GTTTCCGAGC AGTTTGAAAA GATAAGTTCT
ATGATGGATT TTATTTACCG CCATGAAGAC GGAATGATAA GAACCATGAA TGAGCAGCTC
AAAGATGCGG AAGTTGTCTT AAATGAAATA CACGGAATGG AAGAGGTAAG CCAAGCTGTA
AAAGAGGGTT CCGATGAAAT GCTTTTAAAG ATAGAAAAAA TTTCACAAGA GCTTAAAACT
CTTTCTTCCC TTTCGGAAAA TATAACTCAA AGGATGACAG AGATGTCGGT TGGGGTAGGG
CAGGTAAATA AGAATATTCA GGAAGTAAGC GATACTGCAA GAGTGAATAA AGAAACGGCT
TCCGGGGTTG CTTCGGAAAT CGCAAAGTTT AAGGTGTGA
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| Protein sequence | MKIRTSVNLF LTLTLVIVVF GALTSTIYYI RSFIEDVFYK NIHYILDSSF SELQRDIESG
LTISRNFARQ NNLIRWFESY EEDGKDGEDI KAMMLKLASD EKFSTCFAAS GLTGSYYVVK
DKKIVRDKLS ENNAVDSWFY DILNKKDEIF YSIDYNKTLG TVNFWFDYKV ANNKGEVLGL
AGVAVNLDKA VEKMKQSMPS DNSWLSFIGK DDDVIISSNS ELIGKKIELI TGSLIPVEGV
SGLYYCTDKD LGKAIIAKKQ LKNLPYSIML FAPMSDFVPS ILLILRLPII WSFGIFLIVL
LLSSFLLRLS FARFAKMNSV FNKIAEGDFS IRADVSNDEV GSITSVLNNA IEKVSASLAN
IGKHTDKMQG MCENLSANMV ESAAALNEIT ANIDGVRGQV LTQNSSVENA VSKVDEISRG
ISELDVHIDN QTESFMSSTK AVVEIVSNIE GVRGRAQDNL KAIKELEQTT HQGKETVKSV
VDITRIVTEQ SDGLLDAISV IQNTASQTNL LAMNAAIEAA HAGEAGKGFA VVADEIRKLA
EESGEQGKNI TKVLEELKSK IENLNGVGPR VSEQFEKISS MMDFIYRHED GMIRTMNEQL
KDAEVVLNEI HGMEEVSQAV KEGSDEMLLK IEKISQELKT LSSLSENITQ RMTEMSVGVG
QVNKNIQEVS DTARVNKETA SGVASEIAKF KV
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