| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1040 |
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| Symbol | rpsO |
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| ID | 2741314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1068079 |
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| End bp | 1068348 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637159913 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | NP_971648 |
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| Protein GI | 42526550 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000106655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTTA CTAAAGAACA AAAAGCATCG ATCGTAAAGA AATTCGGTGC AAGCGAAAAA
GACACAGGCG ATGTAAAGGT GCAGATTGCC TTATTGACCG AAAAAATTAA CCAGTTGACA
AACCACTGCA AGGACCATCC TAAAGATGCA GGCAGCCGAC GAGGTTTGAT CAGCATGGTA
GGTCATAGAC GCAGTTTGCT TAAATACTAC CGCAGAACAG ACATTGAAGG TTATAGAACT
ATTCTTAAAG AACTTAACCT TAGAAAGTAG
|
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| Protein sequence | MAVTKEQKAS IVKKFGASEK DTGDVKVQIA LLTEKINQLT NHCKDHPKDA GSRRGLISMV
GHRRSLLKYY RRTDIEGYRT ILKELNLRK
|
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