Gene TDE1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1036 
Symbol 
ID2741514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1063945 
End bp1064613 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content36% 
IMG OID637159909 
Producthypothetical protein 
Protein accessionNP_971644 
Protein GI42526546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000228622 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA AAATTAAAAA CTATGTAGGG CTTCTTTTTG AAGGAGTCCC TCAAAGCCGC 
AAAGCTATTG AGCTGCGGAA TGAAATTTTG GCAAACTTAA ATGATAGGTT TGAAGCATTG 
CTCGCAGAAG GTAAATCCGA ACATGAGGCT TACGGGTTTG CTATTGCAGG ACTTGGAGAT 
GTCGATGAAC TTATTAAAAC GGTTTTACCG AATAAAGAGA TTACCGAAAA AATCGATAAA 
GAACGCAAAC GGAAGGGCTT TCTTACCTCA ATTGCCGTAG CACTGTATAT TCTTTCGCCT 
GCCGTGCTTA TTTTTCTGTC AACATTTCAT TATGACAATA TTGGTGTTGT GCTGCTGCTT 
TCTATGGCGG CTGTTGCAAC CTCCATTTTA ATTTACGCAA ATATGAGTAC TCCAAGTGAA 
GTTCAATCTT ATTTCAAAAA AGAAGAAAAA ATATTTTCGC ATAATAATTA TGGGTCTAAT 
AAAAACTATT TTTTTACATC GCTTGAAAAA TTTTATTGGA CATTAGTTCC GCTCGTTTAT 
TTGGCCGTAA GTTTTTACAC ACACGCATGG CATATTTCAT GGCTTATTTT TATTGCCGCC 
ATAGCTGTTT GGCAAGGCGT AAAATTGCTT ATTATTTGGT CTAATTATAA AAATGAGGAA 
AGCAAATGA
 
Protein sequence
MNEKIKNYVG LLFEGVPQSR KAIELRNEIL ANLNDRFEAL LAEGKSEHEA YGFAIAGLGD 
VDELIKTVLP NKEITEKIDK ERKRKGFLTS IAVALYILSP AVLIFLSTFH YDNIGVVLLL 
SMAAVATSIL IYANMSTPSE VQSYFKKEEK IFSHNNYGSN KNYFFTSLEK FYWTLVPLVY 
LAVSFYTHAW HISWLIFIAA IAVWQGVKLL IIWSNYKNEE SK