Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0982 |
Symbol | |
ID | 2740554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1006617 |
End bp | 1008392 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637159856 |
Product | dihydroorotate dehydrogenase/oxidoreductase, FAD-binding |
Protein accession | NP_971592 |
Protein GI | 42526494 |
COG category | [C] Energy production and conversion [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0423353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAGTA AGGCAGAAAT AATACAAAAA ATTAAAAATG CAGGGCTTGC CGCGAGGGAA GGAAGGTCTG CTCCTGTTCT TGCAACCGTG TCGGGTGTTC TTTCTACAAA GCCTAATTTG ATAAGGTACT GTGCCGATGA GCTTGGCTTC GGCCTTGTAA CCACAAAGAG CTTTCAGGTG CTGCCCAATC CGGGAAATAG AGAACCTATC CTTTGTGAAC CCGAATTGGG CTGTTTCGGT AATTCCGTCG GTCTTCGTAA CTGCGGAATG GAACAGGCCG TAAAAGAACT AAAAGAGCTC CGCTCCTCAT GGAAAACCGA TTCTATTTTA AATGTTTCCC TTTCGGCCTC AAACCCTGAA GATTTTATCA GCCTTTTAAA GGGCTTTGAA GAATTAGCCG ACTGCTTTGA GCTTAACTTT TCATGTCCCC ATGCTTCGGC CGGCTTCGGT GCTTCCATAG GCTGCGACCC TGCGATTGCC GCGGAATACG TAAAAATCAT AAAAAAAGCT CTCCCCGATT GTGCCGTGCC GATTTTTGTA AAGCTTACCC CCAATGTAGA AGATATAGGA GCCATAGCTT CCGCCGTAAT CGAAGCAGGC GCAGACGGCA TAACGGCTAT CAACACCGTA GGCCCCAAGG TTTACATTGA GCCCCATTCC GGAAAGCCCA TCTTGCAAAA TAAACTTGGC GGAAAGGGCG GCATGAGCGG TGCGTGGGTT TTCCCAAGGG CTTTGGAATG TATCGGGCAA ATACGGAAGG CTGTAGGAGA AGAAATTCCT ATAATCGGAA TGGGAGGCGT TATGACGGGT GCTCAAGCTG CCGAACTCGT TAGGGCCGGT GCCGATATAA TAGGTATAGG TTCTGCCTGC GGCATGCTTG AACAAGACGA TTTAAAACCT TTTTTTCAAA ACCTTGCCTC GGATGCTCTA AACTGTATAC GCGGTAAAGA AACCGATAAA ACTTCTTCCT TTTTACGTAA AAAAAGGGCC TTGGAATACG AAGCAAAGAC CATAGTAAAA ATCGAAAAAG AAAGTGAAGA TATCATTATA ATTACCCTAA ACGGGAAATG TAAATTCGAA GCAGGGCAGT TTGTGTTTTT ATGGATTCCC GGAGCCGGCG AAAAGCCTTT TTCCCTTGCG GAAGCCGATC CTATAAGCCT TATCATAAAA AAACGCGGCC CCTTTACGGA AGCTCTTTTT GAGCTAAAAG CAGGAGATAC AATCTATATG CGGGGCCTTT ACGGCAAAGG AATAAAACCT CCTAAAACTG AAAATGCTCT TTTAATTGCA GGCGGAACTG GTATTGCAGT CCTTCCTGCC CTTGCAAAAC GCTTAAAAAA GCAAGGAGCC TTAGTCTCTA CCTATGTGGG AACTTCCGAA GAAATTAAAA AAAAGGAGCC CAACGGTATC GAAAAAATTC TTATTGAATG CGGCGCCTAT AAAAAGGTTG CCGACAAGGG TGTTATCGGC AGGGTGCTAA ACCAATTCCA AAAAGACAAT ATTGAAGGAA ATACCGGCCT CCCGATTCAG GGAAAAGCCG AAAAGATGGG CAAGCAGGAC TTTTTTACGG CCTATCTGGT AGGGCCTATG ATTTTTATGC GCAGGGCTTC CGAAATTCTT TTAAAATTGG GAGTCCGCAA ATCTCAGATT TTTATGTCAT TAGAGATGAA CACGATGTGC GGGGTTGGTA TTTGCGGAGA ATGTTCTTGC GGAAATATCT TGACCTGCAA AAAGGGGACA TTTGTCAGTC TTGATCAAAT TGACTCCGTT TATTAG
|
Protein sequence | MRSKAEIIQK IKNAGLAARE GRSAPVLATV SGVLSTKPNL IRYCADELGF GLVTTKSFQV LPNPGNREPI LCEPELGCFG NSVGLRNCGM EQAVKELKEL RSSWKTDSIL NVSLSASNPE DFISLLKGFE ELADCFELNF SCPHASAGFG ASIGCDPAIA AEYVKIIKKA LPDCAVPIFV KLTPNVEDIG AIASAVIEAG ADGITAINTV GPKVYIEPHS GKPILQNKLG GKGGMSGAWV FPRALECIGQ IRKAVGEEIP IIGMGGVMTG AQAAELVRAG ADIIGIGSAC GMLEQDDLKP FFQNLASDAL NCIRGKETDK TSSFLRKKRA LEYEAKTIVK IEKESEDIII ITLNGKCKFE AGQFVFLWIP GAGEKPFSLA EADPISLIIK KRGPFTEALF ELKAGDTIYM RGLYGKGIKP PKTENALLIA GGTGIAVLPA LAKRLKKQGA LVSTYVGTSE EIKKKEPNGI EKILIECGAY KKVADKGVIG RVLNQFQKDN IEGNTGLPIQ GKAEKMGKQD FFTAYLVGPM IFMRRASEIL LKLGVRKSQI FMSLEMNTMC GVGICGECSC GNILTCKKGT FVSLDQIDSV Y
|
| |