| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0978 |
|---|
| Symbol | |
|---|
| ID | 2740550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1002008 |
|---|
| End bp | 1002484 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637159852 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971588 |
|---|
| Protein GI | 42526490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0120039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGAGA ACTCTTTTAG AGACATTGAC GCACTGACTT CCGTTACGCT GCCGGACGGC
TTAAAGGATA TCGATAGATA TGTGTTTTAC GGCTGTCCCA ACCTTGTAAC ACTTAACCTG
CCGTCTTCGC TGAAATATAT CGGCGGCATT TCAATTAGAG GCTTAAAAGT GAGCTCGATG
GTTGTACCGG AAAACATAAA AGTTCTTAAC TGGTACGTTC TTTCGAACTG CCCTGAATTG
ACGTCGGTCG AGCTCCCCTC AACGCTTACC ATAATGGACT TTTATGTCTT GTCTAGCGAT
CCTAAACTGA AGACGGTAAC GTGCAAAGCG GCAAATCCGC CGGCTATTAC GGCAGGCCAG
CACGTGTTTG AAAACACGCC CATCGCATCT GCAAGGCTCC GCGTCCCCGC CGGCTCCAAA
GCACTCTACC AAGCCGCAGA AGGCTGGAAA GACTTCGGTA CGATTGTGGA GTTTTAG
|
|---|
| Protein sequence | MEENSFRDID ALTSVTLPDG LKDIDRYVFY GCPNLVTLNL PSSLKYIGGI SIRGLKVSSM
VVPENIKVLN WYVLSNCPEL TSVELPSTLT IMDFYVLSSD PKLKTVTCKA ANPPAITAGQ
HVFENTPIAS ARLRVPAGSK ALYQAAEGWK DFGTIVEF
|
|---|
| |