Gene TDE0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0944 
Symbol 
ID2740977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp966387 
End bp967097 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID637159818 
Producthypothetical protein 
Protein accessionNP_971554 
Protein GI42526456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00241064 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACTTAC GCCCCAACAC CTTGACCAAG GACAACGACA GGGACTGCAT AGCGGATGTT 
CATGCACATG CTGCTACGCA GAGAAATGAG GACATTGCGG AAATGATCAC CAAAGAACGC 
TCGGAATTCA GCAAGGAAAC AATTATCAAC ATTCTCAACA TGAGGGATAA GGCTGTAAAA 
GACCTTATCC AAGAAGGTTT GAGTTTTATG GACGGTCTTG TACAAATTAG CCCGCGTGTA 
TCGGGTGTAT GGGAGACGGA AAATTCTTCT TACGATGAAA AAATACACAA GCGTACCGTC 
GACCTAATCC CGACTGCGGA TTTACGCACA ACCCTTGATG CAATTGGTGT TAAAGTGCTG 
GGTGCAAAAG AAGAAACTGC CCGCATTACC GAAATAACCT ATACTGCAAC GGGCTTAAAA 
GACGGTTCTC TCACAATCGG CGATGATATT ATAATCGAGG GAAGCAAAAT CAAGGTAGAC 
GAAACCGATC CAGCTCAAGG CGTGTTTTTT AAAGCCGCAG ACGGCACCGA ATACAAGACT 
AACCGCCGGC TTTCGGTTAA TAACCCTAGC CAAATCATCG CCCGCGTGCC TAAAGAAGTA 
CCGGAAGGAA AGGTAGAAGT AATGGTGCGG ACTAAATTCA GCACTGGCAA TAAAACTCTT 
TTGCAAATAC GCGAAATAGT ATATGGCTAT CCTTGCAAGG CAAAGGCATA G
 
Protein sequence
MHLRPNTLTK DNDRDCIADV HAHAATQRNE DIAEMITKER SEFSKETIIN ILNMRDKAVK 
DLIQEGLSFM DGLVQISPRV SGVWETENSS YDEKIHKRTV DLIPTADLRT TLDAIGVKVL 
GAKEETARIT EITYTATGLK DGSLTIGDDI IIEGSKIKVD ETDPAQGVFF KAADGTEYKT 
NRRLSVNNPS QIIARVPKEV PEGKVEVMVR TKFSTGNKTL LQIREIVYGY PCKAKA