| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0929 |
|---|
| Symbol | argF |
|---|
| ID | 2740394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 951809 |
|---|
| End bp | 952825 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637159803 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | NP_971539 |
|---|
| Protein GI | 42526441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.142101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAG AAATTCGCGG AAAGAGCGCA AAAAACTTGC GCGGAAGAAG CTTTCTAAAA
TTGTTGGATT TTACTACAGA CGAAATCCGC TATTTACTTG ACCTTTCAAA AAATTTTAAA
GACATGAAAA GGGCCGGAAT TCCTCACAGA TACCTAGAAG GAAAAAACAT CGTTCTTCTT
TTTGAAAAAA CCTCTACAAG AACACGATGC TCTTTTGAAG TTGCAGGTTA TGACCTTGGA
ATGGGCGTTA CCTACCTTGA TCCCAATTCT TCACAGATGG GACATAAAGA ATCTATCGAA
GACACAGCCC GTGTTTTAGG CAGAATGTAT GACGGTATCG AGTACAGAGG CTTCAGCCAA
GAGCTTGTAG AAACATTGGC CGAATATTCC GGTGTTCCCG TATGGAACGG ATTAACCGAC
CTTTTCCACC CGACTCAAAT GCTTGCAGAC CTTCTTACAA TCGAAGAAAA ATTCGGCTAT
TTGAAAGGAC TTAAATTTAC ATACATGGGA GATGCACGAA ACAACGTAGC CAACTCCCTC
ATGATAGCCT GCGTAAAAAT GGGAATGCAC TTTACGGCAT GTTCACCCAA GCACCTCTTC
CCCACTGAAG ACTTGGTAGC CGAAGCAAAG AAAATAGCTG CCCAAACAGG CGGAAGCGTA
ACCCTTACCG AAAACGTAAG CGAAGGCACA AAAGGCGCTC ATGTTCTTTA TACCGACATT
TGGGTATCTA TGGGAGAACC CGACAGCGTA TGGGAAGAAC GCATTAAGCT CTTAAAGCCC
TATCAGGTAA ACAAGGCCGC TATGGACAAT GCAGACAAGG ATGCAATCTT CTTGCACTGC
CTCCCCTCCT TCCATGACTT AAAGACAACT AAGGGTCAGG AGATTAACAA AAAGTTCGGT
CTTCCCGAAA TGGAAGTTAC AAACGAGGTT TTTGAATCTC ATAAATCAGT TGTTTTTGAT
GAAGCCGAAA ACCGCATGCA TACAATCAAG GCTGTTATGT ATGCCACAAT GTGCTAA
|
|---|
| Protein sequence | MLKEIRGKSA KNLRGRSFLK LLDFTTDEIR YLLDLSKNFK DMKRAGIPHR YLEGKNIVLL
FEKTSTRTRC SFEVAGYDLG MGVTYLDPNS SQMGHKESIE DTARVLGRMY DGIEYRGFSQ
ELVETLAEYS GVPVWNGLTD LFHPTQMLAD LLTIEEKFGY LKGLKFTYMG DARNNVANSL
MIACVKMGMH FTACSPKHLF PTEDLVAEAK KIAAQTGGSV TLTENVSEGT KGAHVLYTDI
WVSMGEPDSV WEERIKLLKP YQVNKAAMDN ADKDAIFLHC LPSFHDLKTT KGQEINKKFG
LPEMEVTNEV FESHKSVVFD EAENRMHTIK AVMYATMC
|
|---|
| |