Gene TDE0786 details

Gene Information

• Locus tag: TDE0786
• Symbol: rplO
• ID: 2740664
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 814742
• End bp: 815194
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637159659
• Product: 50S ribosomal protein L15
• Protein accession: NP_971396
• Protein GI: 42526298
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000129799
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGAAT TTAATTTAAC TGTTCCTGCA GGAGCAACTC ATAAAAAGAA GATTGTAGGA 
CGCGGTTCTT CTTCCGGTTG GGGAAAAACT TCCGGAAAGG GACATAAGGG TCAGCAAGCC 
CGTTCAGGCG GCAAGGTTTA TGCCGGCTTT GAAGGCGGTC AGATGCCCTT GTACCGTCGT 
GTTGCAAAAA AAGGATTTTC AAACTATCCT TTTAAAAAGG AATTCTATGT TGTAAACCTT 
GCCATGCTCG AAACAAAGTA CAGCGATGGT GAAACCGTAA ACAAAGAGTC CTTAATGCAA 
AAAGGTCTTC TCCGAAAAGG TTCTCTTTAT GTTAAAGTTT TGGGAACGGG AGATATAACA 
AAAAAATTGA CGGTTGATGT CGATAGAATT TCGGCATCGG CTAAGGAAAA AATAGAAAAG 
GCAGGCGGAA CAATAGTTCA GTCTGAAGCA TAA 

 

Protein sequence

MFEFNLTVPA GATHKKKIVG RGSSSGWGKT SGKGHKGQQA RSGGKVYAGF EGGQMPLYRR 
VAKKGFSNYP FKKEFYVVNL AMLETKYSDG ETVNKESLMQ KGLLRKGSLY VKVLGTGDIT 
KKLTVDVDRI SASAKEKIEK AGGTIVQSEA