| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0785 |
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| Symbol | rpmD |
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| ID | 2740663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 814557 |
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| End bp | 814742 |
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| Gene Length | 186 bp |
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| Protein Length | 61 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637159658 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | NP_971395 |
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| Protein GI | 42526297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00447996 |
|---|
| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA GAATTAGTGT AAAATTAGTA AAAAGTACAA TCGGTCAAAA GCAGCCGGTT
TGTTCGACTA TCCGCTCTTT GGGATTAAAA AAGCTTAATT CCACAGTTGA GCATGATGCA
AATCCTGCCG TATTAGGTAT GGTAAAACGC GTTGCTCACT TGGTTGAAGT TAAGGAGTTA
AACTAA
|
|---|
| Protein sequence | MAKRISVKLV KSTIGQKQPV CSTIRSLGLK KLNSTVEHDA NPAVLGMVKR VAHLVEVKEL
N
|
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| |