Gene TDE0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0769 
SymbolrplW 
ID2740309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp807774 
End bp808058 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content40% 
IMG OID637159642 
Product50S ribosomal protein L23 
Protein accessionNP_971379 
Protein GI42526281 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000223701 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA ATGATATACT TATCGCGCCT GTTCTTACGG AAAAAAGCAC AGAACTTCGC 
GAGCAGGGCA AATATGTTTT CAAAGTAGCG CCTAAGGCTA CCAAGATTCA GATAAAGGAA
GCAGTACGAA GATTGTTCAA TGTAAAAGTT ACCGATTGTA CTGTTGTTAA TGTTCGAGGA
AAGACTAAGC GTCTCCGCTA CAAGGAAGGT AAAACTTCAT CTTGGAAAAA GGCAACCGTA
AAGCTTGCTA AGGGCGAGAC AATTAAGATT TTTGAAGGTG CGTAA
 
Protein sequence
MEYNDILIAP VLTEKSTELR EQGKYVFKVA PKATKIQIKE AVRRLFNVKV TDCTVVNVRG 
KTKRLRYKEG KTSSWKKATV KLAKGETIKI FEGA