| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0766 |
|---|
| Symbol | rpsJ |
|---|
| ID | 2740306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 806124 |
|---|
| End bp | 806432 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637159639 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | NP_971376 |
|---|
| Protein GI | 42526278 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000754172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGG AAAAGATTCG CGTAAAGCTT CGCGGATTCG ATGTAGAGTT GGTTGATCAG
AGTTCAAAGG CTATTGTACA GGCTGTTCAA AAAGCAGGTG CAAAGGTTTG CGGTCCTATT
CCGCTTCCCA CTCGGATTAA CAAGTTTACG GTGCTTCGCT CACCTCACGT AAATAAAAAG
TCGCGTGAGC AGTTTGAAAT GCGGACACAC AAAAGGTTAA TCGATATTAT TGAACCTTCG
GCAGAAGTTA TGAATGCGTT ATTGGCATTG GAGCTTTCAG CCGGTGTTGA TGTAGAAATT
AAACAATAA
|
|---|
| Protein sequence | MTKEKIRVKL RGFDVELVDQ SSKAIVQAVQ KAGAKVCGPI PLPTRINKFT VLRSPHVNKK
SREQFEMRTH KRLIDIIEPS AEVMNALLAL ELSAGVDVEI KQ
|
|---|
| |