| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0757 |
|---|
| Symbol | |
|---|
| ID | 2739876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 796949 |
|---|
| End bp | 798016 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637159631 |
|---|
| Product | iron compound ABC transporter, permease protein, putative |
|---|
| Protein accession | NP_971368 |
|---|
| Protein GI | 42526270 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.534132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA ATAAAAACAA AGTGCTGAAA ATAGTTTTTC TATCTTCAGC ACTTCTTTTT
CTTTTGGCGG GACTTTTAAT TTCCATAGTT TTATCGGTAG GATTCGGAGC CGTACGCATA
GCTCCCGCCG AAATCTTAAA AATCGCTCAA TTTAAAATCT TAGGTGCCGG AAGCCTTGAA
GGAATTAAAA AGTCGGCTAT CGACATAGTT TGGATTGTCC GTATGCCTAG GATACTTTTA
GCCTGTCTTA CTGGAATGGG CTTAGCCGTA ACCGGAGTTG TCATGCAGGC AATAGTACAA
AACTCATTGG CAGACCCTTA TATATTGGGC ATTTCGTCGG GAGCTTCTCT CGGGGCAACC
CTTGCAATCG CTTTGGGCGT GGGTGCGAAA CTGGGGCCTA ATTATGTGGG CCTGTGCGCC
TGCTTTTCAG CCTTTGGAAC AGCCTTAATC GTAATAAATG CTGCCAACAT AAAGGGCAGA
GCAAATTCCG CAAAATTACT TATGGCAGGT ATTGCCATAA GCACGATTTT TTCAGCCTTT
TCTTCGTTTA TAGTCTTTAC TACAAAAAAC AGAGAAGCTA TAAGAAGCAT TACCTTTTGG
CTTATGGGAG GCTTCGGCGG AGCAAAGTGG GAAAACCTAG GACTCCTTGC AGGAGTGATA
TTTTTAGGAA TCTTCTTTTT TATGACGCAA TACCGTACCC TTAACCTGAT GCTCCTCGGC
GATAGCGTAT CAATTACATT AGGAAAGGAC TTGCATATTT ACCGCCAAGT CTATCTTTTG
ATATGTTCCG CCATTGTAGG TTTTTTAGTA TACAACGCAG GCATAATCGG CTTTATAGGC
TTAATAATCC CGCACATTTC AAGGATATTT TGGGGAACAA ATCATAAAAA TATAATTCCG
TCATCCGTAC TGATAGGAGC CATAATTCTT ATATGGGCAG ACGTACTTGC ACGCTCCGTT
TCCAGCCTAG GTGAAATACC CGTAGGGGTT GTAATCTCGC TTATAGGTTC TCCGGTATTT
TTATATTTAT TGATAAATAA AGAATACGGG TTTGGAGGTA AAGCATAA
|
|---|
| Protein sequence | MQNNKNKVLK IVFLSSALLF LLAGLLISIV LSVGFGAVRI APAEILKIAQ FKILGAGSLE
GIKKSAIDIV WIVRMPRILL ACLTGMGLAV TGVVMQAIVQ NSLADPYILG ISSGASLGAT
LAIALGVGAK LGPNYVGLCA CFSAFGTALI VINAANIKGR ANSAKLLMAG IAISTIFSAF
SSFIVFTTKN REAIRSITFW LMGGFGGAKW ENLGLLAGVI FLGIFFFMTQ YRTLNLMLLG
DSVSITLGKD LHIYRQVYLL ICSAIVGFLV YNAGIIGFIG LIIPHISRIF WGTNHKNIIP
SSVLIGAIIL IWADVLARSV SSLGEIPVGV VISLIGSPVF LYLLINKEYG FGGKA
|
|---|
| |