Gene TDE0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0709 
SymbolmsrA 
ID2740616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp744571 
End bp745524 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content38% 
IMG OID637159584 
Productbifunctional methionine sulfoxide reductase A/B protein 
Protein accessionNP_971321 
Protein GI42526223 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00161368 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG AAATATATCT TGCAGGCGGC TGCTTCTGGG GCGTTGAAGG ATATTTTCGC 
CAAATTCCCG GTGTTAAAGA AACGGACACG GGTTATGCAA ACGGAAAAAA CGATTCTGCA 
AACTACAAGG GATTACATCA GAGCGATCAT GCCGAGACTG TTAAGATAGT TTATGATTCT 
TCGGTAGTAA GTTTACAGGA ATTATTGGCT CATTATTTTA GAATAATAGA CCCCACATCT 
TTAAACAAAC AGGGAAACGA TGCAGGCCGT CAATACAGAA CAGGTATTTA TTATGTAGAT 
GATTCTATGA TTAAAGAAAT AAATAGTTTT GTAAAGTTTA TGCAAAAAAA ATATTCGAGG 
CCCATTGTTG TTGAGGTAGA AAAACTTAAG CATTTTATTC TTGCAGAAGA CTATCATCAA 
GACTATCTTC AAAAAAATCC CGGAGGATAT TGCCACATAG ACTTAACCCT TGCTTTAAAA 
CCTCTTTATG ATGAAAGTAA ATTTAAAGTA CCGTCAAAAG AAGAATTAAA AAAATCCTTA 
AAACCGATAC AGTTTTCGGT TACACAAGAA AAGGCAACGG AAAGACCCTT TACAAGCGAA 
TATGATAAAT TCGATGCTGA AGGAATTTAT GTTGATATTA CCACAGGGAA ACCTCTTTTT 
TCTTCATTAA ATAAATATGA TGCAGGCTGC GGATGGCCAT CATTTACAAA GGCTATTACA 
ACACAGGCCC TTCAATATTT GGAAGACAAA AGCCTCGGCA TGAACAGAAC TGAAGTCGTA 
TCAAAAACAG GCGGAGCTCA CCTAGGCCAC GTCTTTGATG ACGGCCCTGC CGATGCAGGA 
GGCTTACGCT ATTGCATTAA CGGTGCGGCC TTACGCTTTA TCCCCTACGA TAAAATGGAA 
AAAGAAGGCT ACGGCGATTA TCTTCCCTAT GTAAAACCTA CGGGGAATTT TTAA
 
Protein sequence
MIKEIYLAGG CFWGVEGYFR QIPGVKETDT GYANGKNDSA NYKGLHQSDH AETVKIVYDS 
SVVSLQELLA HYFRIIDPTS LNKQGNDAGR QYRTGIYYVD DSMIKEINSF VKFMQKKYSR 
PIVVEVEKLK HFILAEDYHQ DYLQKNPGGY CHIDLTLALK PLYDESKFKV PSKEELKKSL 
KPIQFSVTQE KATERPFTSE YDKFDAEGIY VDITTGKPLF SSLNKYDAGC GWPSFTKAIT 
TQALQYLEDK SLGMNRTEVV SKTGGAHLGH VFDDGPADAG GLRYCINGAA LRFIPYDKME 
KEGYGDYLPY VKPTGNF