| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0703 |
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| Symbol | |
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| ID | 2739825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 738056 |
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| End bp | 738280 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159578 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | NP_971315 |
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| Protein GI | 42526217 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.751889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTATC CAAAAGGAAA ATATGCTTGG ACGGTTAAGG TTGGAGAGAA AGGGCAGTTC
GTTATACCTA AAGAAGCCCG TGATGTTTTC AACATTAATC CCGGTGATAC CTTGATTGTT
TTGGGAGATA TAAACCAAGG CATCGCCATT CCGCCTAAAA ATATGTTCAC AAGTATTATT
GACAATATTT TCGGAGGTAA TGTACCAAAG GAGGACGAAG AATGA
|
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| Protein sequence | MGYPKGKYAW TVKVGEKGQF VIPKEARDVF NINPGDTLIV LGDINQGIAI PPKNMFTSII
DNIFGGNVPK EDEE
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