Gene TDE0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0642 
Symbol 
ID2740473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp678550 
End bp679254 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content37% 
IMG OID637159518 
Producthypothetical protein 
Protein accessionNP_971256 
Protein GI42526158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.215543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CAGTATTCTT ATTAATTTTT ATTAGTCTTT TTTTGATGAC AGCTTTTTCG 
GAAAAGAGTA TTGAGCCCGA AGTTTATCAA AAACTCGTAG AGTCTATTGT GCGCATTGAA 
GCTCCTAAAA TTAAGGACGG ACATATAATC TTTACTTCAA CCGCTAGGCG CCATGTAGGT 
ATAGCCTTTT CTCATGAAGA CTACAAGCAT ATTCATTCTT TTCGAAAACT ACCCCAAAGC 
GAACTGTATG AAGGCAAGGA GCCCATCTTA TTCTATATTC TCCCGATTCC TGATGAGTTA 
ACGGAAATAA AATATAGGCT TGTAATAGAC GGACTTTGGT CATCGGATCC GGTAAATATG 
AACACAGCCT TCGATAACAT ACACAGCATG AGTGTTTCAC GTATTGAAGT TCCTTACAAA 
AAAGAGTATA AAACCGAGGT AAGCGGTAAA AGTTTAGTAA AATTTACATA TTTAGGAGAA 
CCTAAAAAAA TTATAAGGCT TGCCGGCTCC TTTAATAATT GGGATCCCTT TATGTACGAT 
CTTATAGAGG TTTCTCCGGG ACGATATGAG TTGAATTTAA ATTTACCTTC GGGGACATGG 
CTATATGCTT ACTTTTCAGG CGGAAGCCAG CTGCCCGATA ATACAAATAA AAATTATGTA 
TATACGGCCG ATGGACGGGT CGCTTCGGTT ATAACCGTTA ATTAA
 
Protein sequence
MKKSVFLLIF ISLFLMTAFS EKSIEPEVYQ KLVESIVRIE APKIKDGHII FTSTARRHVG 
IAFSHEDYKH IHSFRKLPQS ELYEGKEPIL FYILPIPDEL TEIKYRLVID GLWSSDPVNM 
NTAFDNIHSM SVSRIEVPYK KEYKTEVSGK SLVKFTYLGE PKKIIRLAGS FNNWDPFMYD 
LIEVSPGRYE LNLNLPSGTW LYAYFSGGSQ LPDNTNKNYV YTADGRVASV ITVN