Gene TDE0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0637 
Symbol 
ID2739362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp671583 
End bp672581 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content40% 
IMG OID637159513 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionNP_971251 
Protein GI42526153 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA TTTTACAAGT TAAAGATTTG GCGGTTACTT TTAAAACTTA TGCGGGAACA 
ATCCATGCGG TAAACGGTAT CTCTTTTAAT CTATACGAGG ATGAAACTCT TGTACTTGTC 
GGAGAGTCCG GCTGCGGAAA AAGCGTTACG GCTCATTCAA TTTTAAAACT CCTCCCCGGA 
AAAAAAACAC GCATACACGA AAAATCCCAA ATTATTTTTG AAGATAAAAA TATCTTGGAA 
TATTCCGAAG AAGAAATGCA GCACATAAGA GGAAATGAAA TATCCATGAT TTTTCAAGAC 
CCTCTGACAT ATTTAAACCC TACAATGCCC ATAGGCAAGC AGGTTATGGA AAGTATTTTA 
ATTCATCAAA GGTTGAGCAA AAAAGAAGCC TTAGAGCGAA CTATAAAAAT TTTAGAGCTG 
GCTCAAATTC CTGACCCCGA AAAAAGGCTC AGGCAATATC CTCACGAATT TTCAGGAGGC 
ATGAGGCAGA GGGTTTTAAT CTCAATAGCC CTTGCAAGCA ATCCTAAAAT TTTAATTGCC 
GACGAACCTA CAACGGCACT GGATGTTACA ATTCAAGCCG AGATATTGGA ACTTATACAA 
AAAATTCAAA AAGAAACAAA GACGGCCGTA ATGCTCATCA CGCATGACCT CGGAGTTGCA 
GCCGAAATTG CTGACCGCAT TCAGGTTATG TATGCCGGAA AAATTATCGA ACGCGGAAGG 
GCCGAAGATA TTTTTAAAAA TGCACAACAC CCGTATACGA AGGCTCTGCT TGCAGCCGTT 
CCCTCAATAG ATCAATTAAA AGAAAATAAG CTTTATTCAC TCGAGGGCAA TCATCCCGAT 
ATGCTTTCTA TTTCAGACGG CTGTGCTTTT GCCGACAGAT GCGAAAAATG TATGAAAGTT 
TGCCTTAGGC ATAAACCTCC CGAAATGCAG ATAAGTGATG AACACTTTAC TTCCTGCTGG 
CTTCAACATG AATTTGCAAA AGGAAAAAAC AATGGCTGA
 
Protein sequence
MKPILQVKDL AVTFKTYAGT IHAVNGISFN LYEDETLVLV GESGCGKSVT AHSILKLLPG 
KKTRIHEKSQ IIFEDKNILE YSEEEMQHIR GNEISMIFQD PLTYLNPTMP IGKQVMESIL 
IHQRLSKKEA LERTIKILEL AQIPDPEKRL RQYPHEFSGG MRQRVLISIA LASNPKILIA 
DEPTTALDVT IQAEILELIQ KIQKETKTAV MLITHDLGVA AEIADRIQVM YAGKIIERGR 
AEDIFKNAQH PYTKALLAAV PSIDQLKENK LYSLEGNHPD MLSISDGCAF ADRCEKCMKV 
CLRHKPPEMQ ISDEHFTSCW LQHEFAKGKN NG