Gene TDE0628 details

Gene Information

• Locus tag: TDE0628
• Symbol: dnaK
• ID: 2739353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 660749
• End bp: 662689
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637159504
• Product: molecular chaperone DnaK
• Protein accession: NP_971242
• Protein GI: 42526144
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0264746
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAGA TTATTGGAAT TGACTTAGGA ACAACAAACT CTTGTGTATC GGTAATGGAA 
GGCGGTGAAC CCGTCGTTAT ACCGAACTCT GAAGGCGGAA GAACGACTCC GTCCATTGTA 
GGCTTTACCT CTAAAGATGA AAGGGTTGTA GGCCAGCCTG CAAAAAACCA AATGATTACC 
AACCCTGAAA GAACCGTTTA TTCGGTAAAG CGCTTTATCG GGCATCGATA CAGCGAGCTC 
ACAGACGAAT TAAAACGCGT TCCCTACAAA ATCGTACCTC AGGGAGAAGA TGTACGAATC 
GACATTGACG GAAAACTTTA TTCCACACAG GAAATTTCCG CCTTTATTCT ACAAAAAATG 
AAAAAAACAG CCGAGGACTA TCTGGGCGAA ACCGTAACCG AGGCCGTTAT AACGGTTCCG 
GCTTATTTTA ATGATGCGCA AAGACAGGCA ACAAAGGATG CCGGAAAGAT TGCCGGCTTG 
GAAGTAAAGC GAATCATAAA CGAGCCGACA GCCGCTTCCT TGGCCTTCGG TTTTAACAAG 
GATTCTAAAA AAGAAAAAAC AATCGCCGTA TATGACCTTG GAGGAGGAAC CTTCGATATT 
TCTATTCTTG AATTGGGTGA CGGCGTTTTT GAAGTAAAAT CCACAAATGG AGATACCCAC 
CTCGGCGGTG ATGATTTTGA TAACAGAATA GTAAACTGGC TTGTTGACGA GTTTAAAAAA 
GATACGGGCA TTGACCTATC TAAAGACAGA ATGGCCTTAC AACGTTTACG CGAAGCCGCT 
GAAAAGGCAA AGATTGAACT TTCTTCGGTT GCAAATACGG AGGTAAACTT ACCCTTTATT 
ACAGCCGATG CAAACGGGCC TAAGCACTTA CAAAAGAGCT TATCCAGGGC AAAGTTTGAG 
CAAATGACGG AAGATCTCTT TGAAAGAACA AAGGAGCCTT GCCGAAAAGC CTTAAAAGAT 
GCGGGTATCA CTCCCGATAA AATTGATGAT ATTCTTTTGG TAGGCGGTTC TACGCGAATG 
CCTAAAGTTT TACAGATTAT AAAAGAAATT TTCGGCAAAG AAGGTTCTAA GAGCGTAAAC 
CCCGATGAAG CCGTAGCAAT GGGTGCCGCT ATTCAGGGCG GTATCTTGGG CGGAGATGTT 
AAAGATGTTC TTCTTTTGGA CGTTACTCCT CTTTCTTTGG GTATCGAAAC GATGGGAGGC 
GTATTTACAC CCCTTATCAA CCGAAATACT ACGATTCCGA CAAGGAAGAG TCAGGTCTTC 
TCGACAGCTG CCGACGGACA GACTGCCGTT TCTATCCATG TATTGCAGGG AGAACGCGGT 
ATGGCCAGCC AAAACAGAAC GCTCGGTAAT TTTGACCTCG TAGGTATTCC TCCCGCACCG 
CGCGGAGTTC CGCAGATTGA AGTTACCTTC GATATTGACG CCAACGGTAT CGTTCATGTT 
TCGGCAAAAG ACCTCGGAAC CGGAAAAGAA CAGCATATCC GAATCGAAAG CTCAAGCGGT 
TTAAGCGAGA GCGAAATCGA TAGAATGGTA AAAGAAGCTG AAGCCAATGC CGAAAACGAT 
AAGCTTGAAA AAGAAAAGGT TGAAGCAAAA AATAATGCCG ATTCTCTTAT TTATCAAACG 
GAAAAAACTC TCAAAGAAAT GGGAGATAAG ATCGGTGCTG CCGATAAGCA AAAAATTGAA 
GCTGCAATAG CCGATTTAAG ACAGGCTCTT AATTCAGATA ATACGGCTGA CATTAAGGCA 
AAGACCGAAA ACCTCCAGCA GGCAGCCTAT AAGATTGCAG AAGAAATGTA CAAGCAGCAG 
GGCGCTCAAG CAGGAGCCGA TCCTAATGCC GGCAGTTCTC AGGGTGCTCA AGCGGGAACC 
GATTACGGTA CTTCAGGTCC CAAAACCGGC ACAGCCGATG ATGTTGACTA TGAAGTCGTA 
AATGATGATA ATGATAAATA A 

 

Protein sequence

MGKIIGIDLG TTNSCVSVME GGEPVVIPNS EGGRTTPSIV GFTSKDERVV GQPAKNQMIT 
NPERTVYSVK RFIGHRYSEL TDELKRVPYK IVPQGEDVRI DIDGKLYSTQ EISAFILQKM 
KKTAEDYLGE TVTEAVITVP AYFNDAQRQA TKDAGKIAGL EVKRIINEPT AASLAFGFNK 
DSKKEKTIAV YDLGGGTFDI SILELGDGVF EVKSTNGDTH LGGDDFDNRI VNWLVDEFKK 
DTGIDLSKDR MALQRLREAA EKAKIELSSV ANTEVNLPFI TADANGPKHL QKSLSRAKFE 
QMTEDLFERT KEPCRKALKD AGITPDKIDD ILLVGGSTRM PKVLQIIKEI FGKEGSKSVN 
PDEAVAMGAA IQGGILGGDV KDVLLLDVTP LSLGIETMGG VFTPLINRNT TIPTRKSQVF 
STAADGQTAV SIHVLQGERG MASQNRTLGN FDLVGIPPAP RGVPQIEVTF DIDANGIVHV 
SAKDLGTGKE QHIRIESSSG LSESEIDRMV KEAEANAEND KLEKEKVEAK NNADSLIYQT 
EKTLKEMGDK IGAADKQKIE AAIADLRQAL NSDNTADIKA KTENLQQAAY KIAEEMYKQQ 
GAQAGADPNA GSSQGAQAGT DYGTSGPKTG TADDVDYEVV NDDNDK