Gene TDE0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0570 
Symbol 
ID2741006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp600309 
End bp601016 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content48% 
IMG OID637159442 
Producthypothetical protein 
Protein accessionNP_971184 
Protein GI42526086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00264936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGT ATTGTTTACG CGAAAACCTA CTCACGCCTG CGCCGGATGA CTACATGGCG 
CAAGTTACGG ACAGTCAAGT ATTCACACTT GAAGATGTAA TTGACCGTAT GGTAAAACGA 
GGTACAACCG TTACACGCAC CGACTTGGTC GCAATAATGC AGCTGTACAC CCAAGAATGT 
TCATTTATCG TCGAAGAAGG CGGCACACTT AACACGCCGC TTATCAACAC TTCAATGAGC 
ATATCGGGCG TTTTTGACGG AGCGGACGAC GCTTTTGATA AAAAACGGCA CACGGTCAAC 
CTGAACATCA ATGCGGGAAC GGCACTTAAA ACCGCAGTCG GCAAGGTAAA AACCATAAAG 
ACTGAAACGG CAAGCACCGA CCCGTACATC ACGAGCGTTT TAGACAAACT GAACGGCTCG 
TCTGACGAAG TCAAAATCGG CTCTGTAATG GAAATAATCG GCAGCCGGTT AAAATTTGAC 
CCTAAAGACG ATGAACAAGG CGTATTCGCC GTATCGGGCA CCAAAACCGT CCGCTGTGCC 
TCGGTAGTCG AAAACAAACC GGCCCGCATC ATCGTTCTTT TGGACGCAAG CGTCCCCGCA 
GGCGATTTTA CGCTGGAAGT ACGGACAAAG TTATCGAGCG ATGGCAGCAA AAAATCGAAG 
ACACTCAAAA AAGGATACTA CCGTAAAACC TTAAAAGCGG TAGTCTAG
 
Protein sequence
MLKYCLRENL LTPAPDDYMA QVTDSQVFTL EDVIDRMVKR GTTVTRTDLV AIMQLYTQEC 
SFIVEEGGTL NTPLINTSMS ISGVFDGADD AFDKKRHTVN LNINAGTALK TAVGKVKTIK 
TETASTDPYI TSVLDKLNGS SDEVKIGSVM EIIGSRLKFD PKDDEQGVFA VSGTKTVRCA 
SVVENKPARI IVLLDASVPA GDFTLEVRTK LSSDGSKKSK TLKKGYYRKT LKAVV