Gene TDE0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0488 
Symbol 
ID2741393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp544600 
End bp545205 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content42% 
IMG OID637159360 
Productputative lipoprotein 
Protein accessionNP_971102 
Protein GI42526004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.241796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGATGTA TTTTCTCCGA AACTATAACT ATGAGAAAGC GGATTTTTTA TATCTTTATT 
TTTGGTTTAT CGTTTTTGTT TTTTTCATGT TTGAGTTTTT TTGTACGGCC TCCTCATTTA 
ATAGAAAGCC GAGGCAGATG CTCGGCTGAT GATTTAACCG TTTTTTTTAT GAGCCAAAAC 
CCCAAGGTCG ATAGGGCGAA GGTAAAACGG CTGGCTCAAT TTTATATAGA AGAAGCTGAG 
ACGGAAGGAA TAAATTCGGA TATTGCTTTT TCGCAAATGT GTTTGGAAAC AGGTTTTTTG 
CGTTTCGGAG GTCTTGTAAG CGAGGAGATG AATAATTTTT GCGGACTGGG CTCACTCGGA 
GACGGAAAAA AAGGAGAAAG TTTTCCAAGT GAGAAGACCG GAGTTTTAGC CCATGTTCAG 
CACTTAAAGG CTTATGCTAC GGCTAAGCCC CTTGTCCGCC CTCAGGCTGA TCCGCGATAC 
AAATATGTTA ATCCTAAGGG GAAGGCTCCT ACAATTTACG GGCTTGCCGG AACTTGGGCT 
GCAGACCCGA ATTACGGCAA AAAGCTTGAA AACATATTGA CACGATTGTA CAAATCGGTT 
TATTAA
 
Protein sequence
MRCIFSETIT MRKRIFYIFI FGLSFLFFSC LSFFVRPPHL IESRGRCSAD DLTVFFMSQN 
PKVDRAKVKR LAQFYIEEAE TEGINSDIAF SQMCLETGFL RFGGLVSEEM NNFCGLGSLG 
DGKKGESFPS EKTGVLAHVQ HLKAYATAKP LVRPQADPRY KYVNPKGKAP TIYGLAGTWA 
ADPNYGKKLE NILTRLYKSV Y