Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0488 |
Symbol | |
ID | 2741393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 544600 |
End bp | 545205 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159360 |
Product | putative lipoprotein |
Protein accession | NP_971102 |
Protein GI | 42526004 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.241796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGATGTA TTTTCTCCGA AACTATAACT ATGAGAAAGC GGATTTTTTA TATCTTTATT TTTGGTTTAT CGTTTTTGTT TTTTTCATGT TTGAGTTTTT TTGTACGGCC TCCTCATTTA ATAGAAAGCC GAGGCAGATG CTCGGCTGAT GATTTAACCG TTTTTTTTAT GAGCCAAAAC CCCAAGGTCG ATAGGGCGAA GGTAAAACGG CTGGCTCAAT TTTATATAGA AGAAGCTGAG ACGGAAGGAA TAAATTCGGA TATTGCTTTT TCGCAAATGT GTTTGGAAAC AGGTTTTTTG CGTTTCGGAG GTCTTGTAAG CGAGGAGATG AATAATTTTT GCGGACTGGG CTCACTCGGA GACGGAAAAA AAGGAGAAAG TTTTCCAAGT GAGAAGACCG GAGTTTTAGC CCATGTTCAG CACTTAAAGG CTTATGCTAC GGCTAAGCCC CTTGTCCGCC CTCAGGCTGA TCCGCGATAC AAATATGTTA ATCCTAAGGG GAAGGCTCCT ACAATTTACG GGCTTGCCGG AACTTGGGCT GCAGACCCGA ATTACGGCAA AAAGCTTGAA AACATATTGA CACGATTGTA CAAATCGGTT TATTAA
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Protein sequence | MRCIFSETIT MRKRIFYIFI FGLSFLFFSC LSFFVRPPHL IESRGRCSAD DLTVFFMSQN PKVDRAKVKR LAQFYIEEAE TEGINSDIAF SQMCLETGFL RFGGLVSEEM NNFCGLGSLG DGKKGESFPS EKTGVLAHVQ HLKAYATAKP LVRPQADPRY KYVNPKGKAP TIYGLAGTWA ADPNYGKKLE NILTRLYKSV Y
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