Gene TDE0420 details

Gene Information

• Locus tag: TDE0420
• ID: 2739061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 472358
• End bp: 473545
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637159292
• Product: hypothetical protein
• Protein accession: NP_971034
• Protein GI: 42525936
• TIGRFAM ID: [TIGR01781] Treponema denticola clustered lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0332682
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCTAA AAATATCTTT AATAATCTTA GCCGGTATTC TTTTATTTTC GTGTTCTAAA 
GAAATTAAAG AATCGGCAGA AGAGCGGAAG TCTGTAGTTA CAAATGACGT TACTGAAGAA 
GAACCGCCGA TTGTACTGAC CGATGAAAAC ACACCTAAAA CAGAGCTTAT AAAATTACTG 
GAAAGCAAAA AAAGACATGC CTGGAGTCTG CATAAAATCC AGTTAGAAAT AGATATGTAC 
GATGTTCATG GAAATTCGTA TGAAGAGTTT GAAAAAAGCG GCATTGACTA TCTAAACAGA 
CAAAAAAATA CAGAGATAGT CAAAGTTGAT TCGGATAATA AAACTATTTA TTGTAAGCAG 
ACATTAAACC TTCCAAGTGG AAAAGAATTA ATATATGATG TTGTTTATAC TTTTTATCCA 
TACCCGAAAA ATTTTGCTTA TACAAATTAT GCACTAAGAG AAAAACCCGT AATAGCCGAT 
AGGCAAGTAC AGGGATCAAA AAAACTTCAT GGGAAAATAA CAGAAGCCGA AAAAGATATA 
AACAAAGATA AAAATATTAA AATATTTGAA AGATACATAA ATAAATACAC CAAGGAATAT 
CGGCATAAAA CGGGTGACAA ACCGTATAAG GTGTTGGATT ATGTAAAGGG TAATTTTAGT 
AATTCAGGAA AAGATGAATA TATAGTTTTA TTCACGGCTC CTTTTACTAA ATCTGAGTTG 
GAAGATGGGA TATTTCTTTT GGAGTATAGC TATATAAAAT ATGTCGAGTG TTTTATCATG 
GAAAACGATA AAGTAATTAA AATGTATAAA CTCCCGGGGC ATTGGGGGCA TGTTGTACCG 
AGAGAAAAAA CAAAAATAGA TTTGGGCGAG CAATTTTCTT TTGGGTGGAT TGCCGATTTT 
AATCAAAATG GAAGGAATGA AATATTTGTT CACCGCAAAG AGGTATTCGG TTCAAGTTTT 
TTCTCAATAG AATTTATTGA TAATAGATTT GTTGAAATAC CTATCACTAA TCGAGGAGAT 
ATTCTTAAAT CAGTTGACTG GGAACAATCT AAAATAGTAG TTGAAACTAA TCCATTTCGG 
TCACTGGTAT TGGATTCTAA AGATACCAGA CCTAAATATT TTGCGGAATA TCAGTGGTGT 
GAAAAAGAGC ATTGTTATGT TCTTTTATCA AATAAACAAT ATAAGTAA 

 

Protein sequence

MKLKISLIIL AGILLFSCSK EIKESAEERK SVVTNDVTEE EPPIVLTDEN TPKTELIKLL 
ESKKRHAWSL HKIQLEIDMY DVHGNSYEEF EKSGIDYLNR QKNTEIVKVD SDNKTIYCKQ 
TLNLPSGKEL IYDVVYTFYP YPKNFAYTNY ALREKPVIAD RQVQGSKKLH GKITEAEKDI 
NKDKNIKIFE RYINKYTKEY RHKTGDKPYK VLDYVKGNFS NSGKDEYIVL FTAPFTKSEL 
EDGIFLLEYS YIKYVECFIM ENDKVIKMYK LPGHWGHVVP REKTKIDLGE QFSFGWIADF 
NQNGRNEIFV HRKEVFGSSF FSIEFIDNRF VEIPITNRGD ILKSVDWEQS KIVVETNPFR 
SLVLDSKDTR PKYFAEYQWC EKEHCYVLLS NKQYK