Gene TDE0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0418 
Symbol 
ID2739059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp469742 
End bp470953 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content32% 
IMG OID637159290 
Productputative lipoprotein 
Protein accessionNP_971032 
Protein GI42525934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0124485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG ACAAATTAAA ACTTATTTTT ATCTTAATGT TAGCGGCTTT TATATTTTCG 
TGTTCTAAAG AAGTTAAAGA ACCTGCGGAA GAACAGAAGC CTGTCGAAGC AAAAGTTGAA 
ACATCTACAA AAACAGAGTC TCAGTCTAAA GAAACTCAGG CAAAAGAAGA AAAAACGGAA 
ACAAAAGAAG TTATAAACGA AACACCCGCT AAAAAAGCCG AAAAAGAGGG GCTTAAATAT 
CTTTCCGATG AAAAGCACTA TATGGCAAAG GGAAGTTTAT TATTTTATAA CTTAAATATA 
AACGATACCT ATGAACAGGC ATTAGCCAAA TTAAAAGATT TTGGAGTTAA CGGTTTATAT 
TCTACAGCAA TGATGCCTAA AAGCTTACAA GAGATGGGCT GTAAGGCTTA CATTCCTGAT 
GATAAGACTT TAGAAGAAGA TTCAAGTAAT GATTTTTATA TAATTTTTAA AGATGACAAA 
ATAATAAGAT TTATCAAATT TTTTGCTTAC AATCTGGGAT TTTATAAATT TTATCTTCCT 
GATTTAGAAT ATATCTACCC TAAAATATGG GAATTAGAAG AATCAAGCGG GAAGGGGTAT 
ACATATTTTG AAACACCGGA TTATTATTCA CACACAGCGG AAAATAATGT TATTTATCGA 
AATGAGATAT ACTATCCGAC AGAGGCGACA ACCATTATAA TGACCAGAGA CGGGTATAAA 
ACTTATTTTG AAGAAGCCGA TCGAAGATCC GACGATATTT TGGAACTTGG CGATTTATAT 
TTTTATGATC TTCACATAAA AGATGATATG GAAACAATAA AAACAAAACT TTTCAACAAT 
TACATTATTT ATAAAGGGGC GGGTTTTTCA CCAGTTTCTG ATTTGTATTA TTCTGTTTAT 
AAGGATAACC CGGATGGTTT TGAAAGTAGG GATGAAGAAG TCTGCGTTTG GTGGTATAAA 
GGTAAGGTTA TACATTTTAG GACCCGATCT TCTGATGAAG ATACATACAT ATTAATGCAT 
CATTTTCAAA GAAAGTACAA AGTTTTTGAA GGGCCCGGAT ATACAGGTAC ATGTTATGGC 
ACTAGAATGG GTAGATATAA ATATAATGTT TGGGTAAGGA AGGGTAAGGA TTTTATGTTT 
ACAATGGAAG ATGAAACAGC ATATATAGAA AATAAATTAT GGAGGTTGAA GTATAAAAAT 
AAAAAGTATT GA
 
Protein sequence
MKKDKLKLIF ILMLAAFIFS CSKEVKEPAE EQKPVEAKVE TSTKTESQSK ETQAKEEKTE 
TKEVINETPA KKAEKEGLKY LSDEKHYMAK GSLLFYNLNI NDTYEQALAK LKDFGVNGLY 
STAMMPKSLQ EMGCKAYIPD DKTLEEDSSN DFYIIFKDDK IIRFIKFFAY NLGFYKFYLP 
DLEYIYPKIW ELEESSGKGY TYFETPDYYS HTAENNVIYR NEIYYPTEAT TIIMTRDGYK 
TYFEEADRRS DDILELGDLY FYDLHIKDDM ETIKTKLFNN YIIYKGAGFS PVSDLYYSVY 
KDNPDGFESR DEEVCVWWYK GKVIHFRTRS SDEDTYILMH HFQRKYKVFE GPGYTGTCYG 
TRMGRYKYNV WVRKGKDFMF TMEDETAYIE NKLWRLKYKN KKY