| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0369 |
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| Symbol | hsdM-1 |
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| ID | 2740121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 418446 |
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| End bp | 421061 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159241 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | NP_970983 |
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| Protein GI | 42525885 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTTA GAAAAAGCGA ATTATATGGT AGTTTGTGGG CAAGCTGCGA TAGTCTGAGA
GGCGGGATGG ACAGCTCTCA GTACAAAGAT TATATTTTAA CACTATTATT TGTAAAATAT
GTATCTGACA AATACAAAGA TATGCCCTAC GGTGAAATTG AAATCCCCGA AGGGGGCAGC
TTTGATGATA TGCTTGCTCT ACGTGGCAAA AAAGGAATAG GAGAAGGCAT AGATAAAGTT
ATAGCAAAAC TAGCCGAAGC GAACGATCTT CGAGGCATAA TAGATAATGC ATATTTTAAT
GATCCAACAA AATTCGGATC AGGACAAGAG ATGGTAGATA AGCTTACCGA ATTGCTTTCA
ATATTTTGTG ATAAAATGCC AAACTTCGGT AAGAATAGAG CCGAAGGAGA TGATATTATA
GGAGATGCCT ATGAATATCT TATGAAAAAT TTTGCAACAG AAAGCGGGAA AAGCAAAGGG
CAATTTTATA CACCAGCCGA AGTTTCCCGT ATTCTTGCTC ACGTTATAGG TATAGAAAAA
GCAAAATCCG GAGAAAGCAC CTTATATGAT CCTGCCTGCG GGTCGGGCTC CCTCCTTATC
CGTGCGGCCG AAACAGCACC TCCCAATGTA GCAGTCTTTG GACAAGAAAA AGATATTACA
ACAGCAGGTC TTGCCAAGAT GAATCTTGTA CTACATAATG TAGCAACGGC AGAAATAAAA
AGCGGCAATA CATTTTCAGA ACCCAAATAT AAAAAACACG ATGATGAAAC GGCACTACGT
CAGTTTGACT TTGCCGTAGT TAATCCGCCT TTTTCCGATA AAAACTGGAC TCACGGTTTA
CAGGATTTTG GACGTTTTGA CGGATATGAA GAAAGACCTC CTGAAAAAAA CGGTGATTTT
GCATGGCTTC TTCACGTTAT AAAATCACTT AAGAGAAATG GAAAAGCCGC TGTTATCCTT
CCTCATGGAG TATTATTTCG AGGAAATGCC GAAGCCTCAA TACGGAAAGC CCTTATAAAA
AAAGGTTTTA TAAAAGGTAT CATAGGACTT CCTCCAAACC TGTTTTATGG AACCGGAATA
CCGGCTTGCA TAATTGTTAT TGATAAAGAA AATGCAGAAA AGCGAAAGGG AATTTTTATC
ATTGATGCAA GTAAGGATTT TATAAAAGAC AATGATAAAA ACCGTTTACG AGAACGGGAT
ATATATAAAA TTACTAAAGT ATTTAATAAT AAAAAAGAAT TGCCTTATTA CTCGCGTTTT
GTTTTCATCG ATGAAATTGA ACAAAATGAT TATAATCTTA ATATACCGAG ATATATTCAA
AACGGAACAT CCGAAGAGGT ACAAAACATT GAAGCTCATC TAAGAGGCGG AATTCCTTCA
GAAGATATTG AAAATTTATC TGCATATTGG GACACATTTC CTAAATTAAA GAGCTCTCTT
TTTAAACCGT TGCGACATGA TTTTTGCTCA CTTGCAGCAG AAAAAGACAG CCTCTATGGA
GTAATTGAAG ACGATAAAGA TTTTTCAAAC TATGCGGATA TTATTGAAAC CGCGTTTGAA
AAATGGAAGC GGAAGGCAAA AAAACATCTG ACTAGTATAA CCAATGATAC AAAACCTAAA
GAGCTTATCC GCTTGCTTGC AGAGTTACTG ATTAAAGAAT ATGAATCCGT TCATCTTATT
GATAAATATG ATGTTTATGA AGTATTGCTT TCGTATTGGA ACAACACAAT GAGCGATGAT
GTCTATCTTA TTATGCAAGA CGGTTATTCT GTAATACGGG AGATAGATAT TTTTACAAAA
GCAAGTACAA ACAAGAACAA TGGAAAAGAA AAAACAATTG AAACCGGTTG GGACGGTAAG
GTCATTTCTA AAGAACTTGT AATAGAGATG TTTTTTCTTA AAGAAAAAAC GGAAATAGAT
AAGATAGAAA AAGTTATTGA TACCGTTCAG GATGAGTTAA ATGAAATACT TGAGAATATA
GATGAAGATT CGGTTATCAA TGAATGTTTG ACCGATAAAA AAAACTTAGA TAAAACACTT
TTAAATTTAA AGATATCTGA AATACGATCT TTTATCATTA ATGATGAAAT AAAAGCCTTA
GTTGAACTTC AAAATTCGGA AAAACCTAAA AAAAAGGAAG TGCTTGCATA TATAACTAAA
AATCCTTTAT GTAAAAATGC TGTAACCGAT AAAGGAACTA TTACGACTGC AAGTATCAAT
AACCGTATTG AAGAAATAAG GGATGCTTTA TCTGTTCCTG AAGAACATGC TGAGGACTAT
GCTTTATTGT GCAAAGCGCA AAACAAGTCC GAATTGATAG AAGAAAATAC AAAATTGCTA
AAAGCACTCC GTACAGCCTT AGATGAAAGG GTTCGTAAGC ATTACGCCAA CCTGTCTGAT
GAAGAATGTA TCAAACTATT GCTTGATTTA AAATGGTTCC GCTCAATTTC AAACGGAATC
TACGAACTGT ATGAGGCTGT AAATCATCAT CTGTCCGAAC GGATTGGCGA ACTTGCCGAA
CGCTATGACC AAACTCTTCC CGAACTTGAA AAAGAAACAG CATTACTTGA AAACAAGGTA
AAATCACATT TACAAAAGAT GGGGTTTGTA TGGTAG
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| Protein sequence | MAVRKSELYG SLWASCDSLR GGMDSSQYKD YILTLLFVKY VSDKYKDMPY GEIEIPEGGS
FDDMLALRGK KGIGEGIDKV IAKLAEANDL RGIIDNAYFN DPTKFGSGQE MVDKLTELLS
IFCDKMPNFG KNRAEGDDII GDAYEYLMKN FATESGKSKG QFYTPAEVSR ILAHVIGIEK
AKSGESTLYD PACGSGSLLI RAAETAPPNV AVFGQEKDIT TAGLAKMNLV LHNVATAEIK
SGNTFSEPKY KKHDDETALR QFDFAVVNPP FSDKNWTHGL QDFGRFDGYE ERPPEKNGDF
AWLLHVIKSL KRNGKAAVIL PHGVLFRGNA EASIRKALIK KGFIKGIIGL PPNLFYGTGI
PACIIVIDKE NAEKRKGIFI IDASKDFIKD NDKNRLRERD IYKITKVFNN KKELPYYSRF
VFIDEIEQND YNLNIPRYIQ NGTSEEVQNI EAHLRGGIPS EDIENLSAYW DTFPKLKSSL
FKPLRHDFCS LAAEKDSLYG VIEDDKDFSN YADIIETAFE KWKRKAKKHL TSITNDTKPK
ELIRLLAELL IKEYESVHLI DKYDVYEVLL SYWNNTMSDD VYLIMQDGYS VIREIDIFTK
ASTNKNNGKE KTIETGWDGK VISKELVIEM FFLKEKTEID KIEKVIDTVQ DELNEILENI
DEDSVINECL TDKKNLDKTL LNLKISEIRS FIINDEIKAL VELQNSEKPK KKEVLAYITK
NPLCKNAVTD KGTITTASIN NRIEEIRDAL SVPEEHAEDY ALLCKAQNKS ELIEENTKLL
KALRTALDER VRKHYANLSD EECIKLLLDL KWFRSISNGI YELYEAVNHH LSERIGELAE
RYDQTLPELE KETALLENKV KSHLQKMGFV W
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