| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0350 |
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| Symbol | |
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| ID | 2741246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 393712 |
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| End bp | 395079 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637159222 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_970964 |
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| Protein GI | 42525866 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAA AAGAGCTGAG ACGATTTAAC ATTTTAACAA AACCGATTTT TCCGCTGTTA
GTTAAAACTT CAATTCCGAC AATAATCGGA ATGTTGATCA GCGTTATATA CAATTTGACC
GATACTTTTT TTGTCGGCCG CTTAAATAAC AGAGCGATGA TTGCGGCAAT TGGTATTGTG
TTTAGTTTTG TCAGCATTAT TCAAGCAATC GGTTTTTGGT TCGGTTACGG CAGCGGTAAT
GCAATGTCAA AAAAAATCGG AGAACAAGAC TATGCGGAAG CGGAAACCAT TTCCTCGGTA
GGAATTGTTT TTGCAATTAT AATAGGTATT CTGATCGCAA TCGGAGCAAG TATTTTTATT
CTACCGCTTT CAAAATTCAT CGGCGGAAGT GCATCTCAAG ATGTTCTCAC ATTTACAGTG
CAGTATTTAA GGATTATTAT TATCAGCATT CCGTTCAGTT TATATGCACT GACTGTTTAT
AATCAGCTGC GTCTTTGCGG AAATGTACGC GACGGAATGG TCGGGCTGCT TTCGGGAATG
CTCAGCAATA TGGTGCTTGA TCCCGTATTG ATGTTTATTT TTAAGCAGGG ATTTATCGGC
GCAGGCTATG CAACGCTAAT CGGTCAGATT ATCGGATGTA TTGTGTTGAC GCTCTTAGCA
AAAAGGCACG AGAGTATTTC GTTCAATCTA AAAAAAGTTC AATACAGCAA AGAGCGTATG
TATCATATTC TTGCAGGCGG TATGCCCAAT TTTTCGCGGC AGGCAATTAC CTCCGCCGCA
TTGGTTTTAC TTAATGTTAA AGCGGCACAA TACGGAGAAA GCATGATAGC GGCTTTAACG
GTAAGTTCAA GAGTTGCCGC TTTGGCTTAT ATGATTATGA TCGGGTGGGG GCAAGGCTTT
CAACCGATTT GTGCAATGAA TTACGGTGCC AAACAATACT CAAGAGTAAA AAAAGCTTTT
ATTACTACGG TTTTAATCGG AACAATTTTT TTAACGGCCG CCTCAATAAT TTTATTTCTC
TTTGCCGAAC AATGTATCGG AGTTATGTCT AAGGATGATG AGGTAATTTT TGCCGGAATT
AAAATACTGA GAATGCAATG CTTTTCGCTG CCGCTTTTAA GCTTTTTTGC CGTGAGCAGT
ATGTTCATGC AGAACATCGG TCATTATTTT TCATCCCTTC TCATATCGAT TTCACGGCAA
GGCTTTTTTT ATTTACCGCT CTTATATATT CTGCCCGCCC TATACGGAAA GACCGGCATT
TACCTGCTGC AGCCTTTCTC CGATGTTTTG TCGTTTTTGT TTGCCGTTGC GGTAGTGTAC
AGGTGGTACT CGTCCGGGGC GTTCAGTTCA GCTTTAAATG CAGGATAA
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| Protein sequence | MDSKELRRFN ILTKPIFPLL VKTSIPTIIG MLISVIYNLT DTFFVGRLNN RAMIAAIGIV
FSFVSIIQAI GFWFGYGSGN AMSKKIGEQD YAEAETISSV GIVFAIIIGI LIAIGASIFI
LPLSKFIGGS ASQDVLTFTV QYLRIIIISI PFSLYALTVY NQLRLCGNVR DGMVGLLSGM
LSNMVLDPVL MFIFKQGFIG AGYATLIGQI IGCIVLTLLA KRHESISFNL KKVQYSKERM
YHILAGGMPN FSRQAITSAA LVLLNVKAAQ YGESMIAALT VSSRVAALAY MIMIGWGQGF
QPICAMNYGA KQYSRVKKAF ITTVLIGTIF LTAASIILFL FAEQCIGVMS KDDEVIFAGI
KILRMQCFSL PLLSFFAVSS MFMQNIGHYF SSLLISISRQ GFFYLPLLYI LPALYGKTGI
YLLQPFSDVL SFLFAVAVVY RWYSSGAFSS ALNAG
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