Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0339 |
Symbol | |
ID | 2739338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 378011 |
End bp | 378628 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637159211 |
Product | TetR family transcriptional regulator |
Protein accession | NP_970953 |
Protein GI | 42525855 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA GTGAAGATAC CAAACAATTG ATTTTGGATA CGGCTAAGCG GGAGTTTTTG GAAAAAGGCT ATAACGCAGC CTCTGTCCGC ACGATTGCAA AGAAAGCAGG CTTAACGACC GGTGCAATTT TTCGGTATTA CGCGGATAAG GCAGCTTTGT TTGAAGCCCT TGTTTCCGAA GCGGCAGACG GCTTGGTCGA GCAATTTAAG GCAGCCCAAG AGGCGCACTT TGAGTTAATT CCCCAAGAAC GGACATCAGA AAGCCGAGAT TTATCGACAG AATATTTACG GCACTTTGTA AACTACGTAT ATGACCGTTT TGACGAATTT AAGCTGGTGC TTTGCGGAGC GGAAGGCACG AAATACGCAA ACTATATCCA TGATCTGGTG GAACTTGATG TGGCACGCAC CGAAACATAT TACCGGCTCT TGCGGGAAAA GGGAAAAATC AAAGGGAGCA TCAGCCTTGA ACTTCATCAC ATGATTACAA GTGCCTATTT TACCGCAGTA TTTGAAACCG TCGTACATGA TATGCCAAGA GAACAGGCTA TGGGATATGT AGAAGAAATC GCCGTTTTCT TTAATTCGGG ATGGGATGGG CTTTTAAAGC TGATATAA
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Protein sequence | MSKSEDTKQL ILDTAKREFL EKGYNAASVR TIAKKAGLTT GAIFRYYADK AALFEALVSE AADGLVEQFK AAQEAHFELI PQERTSESRD LSTEYLRHFV NYVYDRFDEF KLVLCGAEGT KYANYIHDLV ELDVARTETY YRLLREKGKI KGSISLELHH MITSAYFTAV FETVVHDMPR EQAMGYVEEI AVFFNSGWDG LLKLI
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