Gene TDE0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0337 
SymbolnagB 
ID2739336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp376385 
End bp377197 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content37% 
IMG OID637159209 
Productglucosamine-6-phosphate deaminase 
Protein accessionNP_970951 
Protein GI42525853 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR00502] glucosamine-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000149372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTTA TCATAAAAAA CAGTTATGAA GATTGTTCAA AATGGACTGC CGATTATATC 
TGCAATAAAA TTATCGAATT TAAACCTACA AAAGAAAAGC CCTTTGTTTT AGGACTTCCG
ACGGGTTCTA CTCCCTTAGG GGTTTATAAG GAACTTATAA AAAAGCATAA AGAAGGTATT
CTATCCTTTA AGCATGTAGT TACCTTTAAT ATGGATGAAT ATGTAGGCTT GGAAGCGTCT
CATCCTCAAA GCTATCATTA TTTTATGATG GATAATTTTT TTAATCACAT CGACATTGAG
CCTAAAAACA TTCACATCTT GGATGGAATG GCCAAAGATA AAAAAAAGGA ATGCGAGGAC
TATGAAAAAG CTATCCGCTC TTACGGAAAA ATTCATTTAT TTTTAGGCGG AATAGGGGCA
GACGGGCACA TAGCTTTTAA TGAGCCCTAT TCTTCATTAA CCTCCCGCAC AAGAGAAAAA
ACCTTAACGC GGGATACCAT CATAATGAAT TCACGCTTTT TTGAGGGAAA TGAAGACCTT
GTTCCAAAGA CAGCCTTGAC TGTAGGCATC GGCACTATTA TGGATGCCGA AGAAGTTCTT
ATAATGGCAA CCGGACATGC TAAGGCTGAG GCTGTTCATC AAGCAGTAGA GGGGGGGGTA
AGCCATGTTT GGACTGTAAG TGCTTTACAA CTTCATCCTA AATCCATTAT AATCTGTGAT
GATGCTGCAA CAGATGAACT TAAAGTAAAA ACCGTAAAAT ACTTTTTGGA TATAGAAAAA
GGAAATATAG AAACTAATGT ATCAAGAAAA TAA
 
Protein sequence
MRLIIKNSYE DCSKWTADYI CNKIIEFKPT KEKPFVLGLP TGSTPLGVYK ELIKKHKEGI 
LSFKHVVTFN MDEYVGLEAS HPQSYHYFMM DNFFNHIDIE PKNIHILDGM AKDKKKECED
YEKAIRSYGK IHLFLGGIGA DGHIAFNEPY SSLTSRTREK TLTRDTIIMN SRFFEGNEDL
VPKTALTVGI GTIMDAEEVL IMATGHAKAE AVHQAVEGGV SHVWTVSALQ LHPKSIIICD
DAATDELKVK TVKYFLDIEK GNIETNVSRK