Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0337 |
Symbol | nagB |
ID | 2739336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 376385 |
End bp | 377197 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637159209 |
Product | glucosamine-6-phosphate deaminase |
Protein accession | NP_970951 |
Protein GI | 42525853 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000149372 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTTA TCATAAAAAA CAGTTATGAA GATTGTTCAA AATGGACTGC CGATTATATC TGCAATAAAA TTATCGAATT TAAACCTACA AAAGAAAAGC CCTTTGTTTT AGGACTTCCG ACGGGTTCTA CTCCCTTAGG GGTTTATAAG GAACTTATAA AAAAGCATAA AGAAGGTATT CTATCCTTTA AGCATGTAGT TACCTTTAAT ATGGATGAAT ATGTAGGCTT GGAAGCGTCT CATCCTCAAA GCTATCATTA TTTTATGATG GATAATTTTT TTAATCACAT CGACATTGAG CCTAAAAACA TTCACATCTT GGATGGAATG GCCAAAGATA AAAAAAAGGA ATGCGAGGAC TATGAAAAAG CTATCCGCTC TTACGGAAAA ATTCATTTAT TTTTAGGCGG AATAGGGGCA GACGGGCACA TAGCTTTTAA TGAGCCCTAT TCTTCATTAA CCTCCCGCAC AAGAGAAAAA ACCTTAACGC GGGATACCAT CATAATGAAT TCACGCTTTT TTGAGGGAAA TGAAGACCTT GTTCCAAAGA CAGCCTTGAC TGTAGGCATC GGCACTATTA TGGATGCCGA AGAAGTTCTT ATAATGGCAA CCGGACATGC TAAGGCTGAG GCTGTTCATC AAGCAGTAGA GGGGGGGGTA AGCCATGTTT GGACTGTAAG TGCTTTACAA CTTCATCCTA AATCCATTAT AATCTGTGAT GATGCTGCAA CAGATGAACT TAAAGTAAAA ACCGTAAAAT ACTTTTTGGA TATAGAAAAA GGAAATATAG AAACTAATGT ATCAAGAAAA TAA
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Protein sequence | MRLIIKNSYE DCSKWTADYI CNKIIEFKPT KEKPFVLGLP TGSTPLGVYK ELIKKHKEGI LSFKHVVTFN MDEYVGLEAS HPQSYHYFMM DNFFNHIDIE PKNIHILDGM AKDKKKECED YEKAIRSYGK IHLFLGGIGA DGHIAFNEPY SSLTSRTREK TLTRDTIIMN SRFFEGNEDL VPKTALTVGI GTIMDAEEVL IMATGHAKAE AVHQAVEGGV SHVWTVSALQ LHPKSIIICD DAATDELKVK TVKYFLDIEK GNIETNVSRK
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