| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0312 |
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| Symbol | |
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| ID | 2740511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 343775 |
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| End bp | 345499 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637159184 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | NP_970926 |
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| Protein GI | 42525828 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00568204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGC GAGATTATTT TGTCGTTATG GCTTTCGCTT TAAGCCTTAT ACTTTTATTT
TTACAGCAAT TTTATCCTAA AAACACGCCT GCAAGTATTA TCCATGCAAT AGATATTTTA
ATTCTTCTAT TTGTTATTTC AGAAACTTTT TTTGCCGTCC GTCAGGAAAA GTATATACGC
AAATATTTTC AAAATAATCT TCCAAACTTT TTAGCAATGG TAATATTTGC ATCGATATTT
ATTACCTTTA AAATACAAAT AGGTTTTAAA AATATTTCTG AAGAATTAAG TATTGTTTTT
GATATTTTTA AAAATATATT TTTGTTTGGA AAAATAATTA GATTGATAAG CAAAAGAGCC
GGATTAACTG CGAAAATCAT TTCAAACCCT GCCCGTACTT TGATTATTTC TTTTTTTATG
GTAATAATCA TCGGCAGTTT TTTACTTATG CTTCCTGCAG CATCTGCAAA AGGCTCTCCC
TTAAATTTTT TAACGGCACT TTTTACGTCT GCTTCCGCCG TATGTGTTAC AGGCTTAAGT
GTTATAGATG TTTCTTCCGA ACTTACCATA GTCGGAAAAT TTATTCTGAT TGTTTTAATT
CAAGTCGGAG GACTAGGCAT AATGGTTTTT TCATTTTTCG GAATGCTTGC CTTCCGAAAA
AAAATGACGG TCAGTGAAAA GCTCACAATT TCTTACATGG TCAGTGAAGA TGACATGTCA
AACCTTTTTA AAACATTAAG AGTAATTGTT TTATCTACAT TCTTTATAGA AGCCCTAAGT
GCTGTATTTT TATTTATAGG GTTTTCACGC ATTTTAGGCT TCAATCTTAA AACCCTAGGC
TTTGCATTAT TTCATGCAAT ATCCGCATTC TGTAATGCGG GCTTTGCTCT TTTTTCAAAC
AATTTGGAAT CTTTTACCTC CGATATTATT ATCAGTTTAA CAATAGGCTT TACCATAATT
TTAGGCGGAA TAAGTTTTGC AGTTATTTAT GATGTTTTAG CTAAGGTCAA GACAGATATA
AAAAATACAT TTTTAAAGAA AAAAAAGACA GATTATTTAA TTTCGGTAAA TACAAAAATG
ATTTTAAGCC TTACGGTTTT TATTCTTTTT ATTTCTTTTG CTTTTTTTTA TTTACTTGAG
CATCGCAATA CTATGAAAGA GATGTCTTTG GGAACTCAAT ACCTTGCAAG TTTATTTCAA
GCTATAACAT TGCGTACCGC AGGATTTTCT ACGGTTTCCT TCCTTAATTT GACAAATGCA
ACCTTGCTTT TTATGATATT CATAATGTTC ATGGGAGGAG CTGCAGGAAG TACAGCCGGA
GGAATAAAGC TGAATACAAT TGCAGTAGTC TTTGCTTTTT TTAAATCTTT TTTAAAAAAT
CAAAAAACGG TTGTAATTAA AAATGTTTCG GTGCCTGAAG AACAAGTAAA AAAAGCTTTT
TTAATTTTCG GTTTCGGGCT TGCGGCAATT TCAGTTGGAA TTTTTTTATT AACAATTACC
GAAAGCCTTC CTTTTTTAGC ATTGTTGTTT GAAACCGTTT CGGCCTTTGC AACCGTGGGG
CTTTCTACAG GAATAACGGC AGCGCTTTCA CCAGCCGGTA AAATAGTAAT AATAATCTTA
ATGTTTATCG GAAGAGTAGG CCCCTTAACT TTTTTAACTG CGGCCGGTAA AAAACAAAAA
AATGATGATA TAGAATATCC TTATGGAAAT ATAGCAATAG GATAA
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| Protein sequence | MRKRDYFVVM AFALSLILLF LQQFYPKNTP ASIIHAIDIL ILLFVISETF FAVRQEKYIR
KYFQNNLPNF LAMVIFASIF ITFKIQIGFK NISEELSIVF DIFKNIFLFG KIIRLISKRA
GLTAKIISNP ARTLIISFFM VIIIGSFLLM LPAASAKGSP LNFLTALFTS ASAVCVTGLS
VIDVSSELTI VGKFILIVLI QVGGLGIMVF SFFGMLAFRK KMTVSEKLTI SYMVSEDDMS
NLFKTLRVIV LSTFFIEALS AVFLFIGFSR ILGFNLKTLG FALFHAISAF CNAGFALFSN
NLESFTSDII ISLTIGFTII LGGISFAVIY DVLAKVKTDI KNTFLKKKKT DYLISVNTKM
ILSLTVFILF ISFAFFYLLE HRNTMKEMSL GTQYLASLFQ AITLRTAGFS TVSFLNLTNA
TLLFMIFIMF MGGAAGSTAG GIKLNTIAVV FAFFKSFLKN QKTVVIKNVS VPEEQVKKAF
LIFGFGLAAI SVGIFLLTIT ESLPFLALLF ETVSAFATVG LSTGITAALS PAGKIVIIIL
MFIGRVGPLT FLTAAGKKQK NDDIEYPYGN IAIG
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