Gene TDE0162 details

Gene Information

• Locus tag: TDE0162
• ID: 2739595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 188038
• End bp: 192942
• Gene Length: 4905 bp
• Protein Length: 1634 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637159031
• Product: hypothetical protein
• Protein accession: NP_970778
• Protein GI: 42525680

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA TACAGAAAGC TCTATTTATA TCGATTTTTC TCTTTGCCGC AGAAATACTC 
GCCTCGGCGC AAACCGTCTA TACGTGGACG GGTGGACACG GTAATTTTAA AAATCCGTCA 
AACTGGAGCC CGAACCTTCC CGCCGGCACA ACGCCCGCCG CCTTTCCGGC CGGTACATAT 
AAAATCCTTT CCGCCGGTCC TTGTTTTTTA ACCGAAAATA TTACCTTTGC GGGGCCGGCG 
CAGATTGAAG TAGGGTCGGA AACAGCCGCT GCAGGATTGC AGTTAGCCCA TTACACTTTG 
CGCGGGACGG TAACCGTAAC CGTAAATAAA AAGGGAACGC TGGAACTTTC CGGTACGGAT 
GAACAGCGGA ATCTGTTCAG TGGCGGAAAA ATAATTCTAA AAACCGACTC TACTGTCGTA 
TACTACGGCA ATACCGGCAA AGATATTTGG CAGGGGCCAT ATCAAAATTT TAAAGTAACG 
GGAAACATTA AAGCCCAATC CCTTACGGTA GAGAAAACGA CGTCGATAGG GAATAATGAT 
CCGCTAATAA CAACGGTAAC AATAAAAGTT AAAACGCAAA CCTATAAGGG GGCCGTAACT 
GTACAAAAGG ATGTCACATT TGATGCGGCA ACTTCCGTAA CTTTTACAGC GGCAGCGAAC 
GTGAACGCGG GGACGCAAAA TCTGTCTTTT AAAGGTGGCG GAGCGGTGAA TATGCAGGGA 
GTTACCGCCG GAACCGTGGA TGCGACGGGA GCGTCGAGCC TAAAGGTAAA CGGAACCGTT 
ACTTTGAGCG GGGATTTAAA AGCAAAGAAT TTGGCTGTAA ATACCGCAAC TGTCTCTGCC 
GCAAAAGTTG AAGTGAGTCA AGCGACAACC GTAAGCACTG CCGCAACGAT TACCGCACCG 
ACGCAAACGT ATACGGGCGC CGTCAGTGTA AATGCGGATA CGGCATTTGA AGCGGGAACG 
GCGCTTACAT TTGAGAGTGC CGTTTTCGGT TTTTTAAAAA ATATTGTCAT AAAGGGCAAA 
GACATAACGT TTAATTCTGT GGTAAGTGCA GTTGATTTAA CGGTTATGAA TAAAAACGGC 
GGCACACTCA CAATAAAAAA AAATATAACG GTGTCGAACT CTCTTATTCA AAAAGATATG 
TCGCCCCCTT ATTCGCCGCT CGGCCCTGTG GTAATAGATT CGGATTCCGA TGTAACGATT 
ACAGCTCCGA AGCAGGTTTA CAACGGCGCC GTTACCCTGA AGGCGAACAC GACATTCAGC 
GCGGGGGCTC CGTCCGGACC ATTGGCGCTT CAGTTTGAAA AGGCGGTCGC CTCTCCCGCT 
CATAAAAATA TCGTTTTAGA AACAGTTACT TCGACCGGAA TAAAAACGGA ACAAAGCGTC 
AGTGCGGGTA AAATTACCGT ACGGAACGGA ACCGGCAACA GTTCCAGGTG GGAATCATAT 
GGTATCGTTA GCGCCGAAGA CGATATTGAA GTCGCCGGAG TTTGGCAGCA TTCCGCTAGC 
GGAAATATAA CAGCAAAGGG TAATGTAAAA GCCGGAACTT TTAAACAGAC GACGCCCGGA 
TCTACCCTTA TTTTTGCCGG AAACGATACG CAAACCTTAG AAGTCGGTTC GTCTTCTCAA 
ATACAACGGT TGAAAAATAC GGCAAGCCTT AAATTGAATT CCGACATTAA AATAATCGAA 
ACGTTTGAAA ACAACGGCTC TTTTGCTCAT AATGACAAAA CCGTAACTTT CAACAGCCTG 
TTTTCCAAAA TATCGGGAAC CAGAGAACCG ACCTTTTTCA ATTTAACAAT AGCGACCGGT 
GCCGAGCTGA AGACTGAACA GGCAAGCGTT AAAATCAGTG GAACTTTCAC AAATAATGGG 
ACGTTTACTC ATAATAATAA AAAAGTCATA TTCAACGGAC TGCTATCCAA AATAGCCGGA 
AGTACGGAAA CCGAATTTTA TAAGCTAACG GTAGATGCCA ATAAAATTTT GCATCTTGAG 
CAAAACATCA TTGTTGTCGA CACTTTTGAA AACGGAGGAA TTTTCAAGGC GCGTGGTAAT 
ACCGTAACAT TAGCTCCGGC GAGTACCGCC GCAAACATTC AGGGAAAGAA TACGGCAACC 
GATACGGAAT TTGCTGCGAT ATCGTGTTTG GGAGCCGGCG GAAAAACGCT CACGATAAAT 
GGAAAAATCA TGGTAGCTAA CCTGAAGATA GGCGGAGCAT CAGAGTTAAA TAAATTAACG 
GTTCAAGGCG GGGCGTCCTC CGAAATTACC CTGACTTCCG ATCAAACTCC CGATCCGGGC 
ACAAAAAAAG GCTATTACTT GGATGTAAAC ACGAATATCC CTATAGCAGA CGGGAAAACC 
TATTATGTTG CTGAGAGCGT CTTGGGAAAT CCAAATCCGA AAAACTGGGA ACATATGTCT 
TCCACATGGA AAACTAATGC AACAACCACA AATTGGAATA CTGCATCAAA CTGGACGCCC 
GAAGTAGTTC CGGCCGCCGG TTGGCCGGTC ATAATTCCCG CGGGAGGAAC TAAATATCCC 
AAACTTACAG CGAATGTAAA GGCAAAAACG ATTACCCTTG CTCCCGGCGC CAAATTGGAT 
TTAGCAGATT ATGTTATAAC AAAAAGCAAC TTGGTTTCCG ACTTTACTCC TATTACAAAT 
AACGGCACCC TCAGAATGAA AGGGACGTCT TATTTAACTG ATCCGAAAGG ACAAAAAGAG 
TGGCTCGAAA GCACAGTTCT CGCCAATCAA ATAACGCACG GAACAACCTC CGTAATAGAA 
TATTACAGTA CTGCGAATAA TCCCCTTTGG CAGGGGCCTT ATCAAAATCT GACAGTAAGC 
GAGGGAAGAA CATCTCTTAC CCCTATAATT CCGGGTTCAG GTTCTACGGC AGCTGATTTA 
ATCGTAGAAA AAACTTTTAC GGTTGCCACC GATGCGGGAG ATAACGTTAT CGTTACTGCA 
AATTCGCAGC TGTACAAACA AACTGTTTCA TTAAGGAAAA AAACAACCTT TAGTTCATTC 
GGAGGAACCG GAACGGTATT TAAGGGCTCG GTTGCAGCTT CGGAAATCGA TATAGGCTTC 
AGTGGAAACG GCCTTATTCA AACGGAGAGT GCTGTTACCA CAAAAAACAT CACCGTAAAT 
TCAGGCACAG GCGCATGGAC TTCATCAGGG ACAATTACTG CATACGATAT TACCGTGAAC 
AGGAGCTGGA CATCTTCAGC CGATGTTACC TCTGTCGGAA ACATTACGGC AAATGGCTGG 
ACGGCTAACA ACGTAAGACT TAAAGGGAAC CTTACCGCTG CAAGGTTTAA TCAACTGATC 
GGTACATTAA CCTTTAACGG TACGGGAACA CCCGAGCAGG AGCTTAATTT TAACGGTGCC 
GGCAATAAAA ACATATTCAA TCTTACAATC GATACCGGAG CAAAGGTAAA ATTACTTTCT 
CCTGTTACCA TTGTAAGAAA CATTACCAAT TATGGAATCT TTGATGCAGA CACACACACA 
GTAACACTGG ATAATAATAA TAGTCATACA ATTACAGGGA CTTCATACGG CGATAATACA 
AAAAAGACAG AATTCCATAA CTTGGAATGT ACAGGAGCGG TCGGAAAAAC GCTTACGATA 
AACGGAAAGA TTACCGTAGA AAATGCACTT AAGCTTTCAG GTGGAGGCAC CTCAAACCGC 
TTAATAATCA ACGGAACAGG GAAAATATCT CTGAAAACAG ATCATAGCGG TCATACTGAT 
CTTTCACGGC AATTTCTAAA AATTGATACT CGAAATCTAG AAGTTTTAGA AAAGCCTTAT 
GTTGTTAATC AAAGTGTAGA TCATAACGGT AAGCCCAAAA GTCACAACGG CTGGGTATTT 
TATAAAGATC CTGCCACTAT CAGCATTGAA AACTCACTTG CTAAACCTGG AGATGAGTAT 
ATTTACCTTG TATTTAGCAA TACAAGTCAT ATGAGTGAAG AAGAACTTAA ATTTATAGGT 
AAACCTCCTT ATAATTGTAA ATTAAGAATC ACAGGCGGCA GTACTACTTA TGAATCAGAT 
TTGCAGGATG TTTCTCCCGC CAACCCAGAA AAAACACTAT GGAAAATTAA GCTTGACAAA 
GAAATCAAAG CTAATGATAT TCTTAAACCC TCTTGTCAGG TAGTTTTAAA TTATTTTGGT 
ACAAATAAAA CCAAACCCCA CATCTCCGAT ATCGGAATCA ATATAGTAAA ACCACAAAAA 
GCTTTTAATT CCATAGTACT CCGCACGTTT AACGCTAATC CTGATGACAA AGCCTTACCG 
ACCCTGGATA TCACAATACC GACAGAAAGA GAAAGCACAG TAACATCAGA CAACTTTAAG 
CTGTATTTTA TCTCAAAAGA CGCTCCGGGC AGATTTTGGC ATCCCGATAC TATAACATTG 
CCACCCGGCT CTTTTGCAAA TCCTCAATCA GGCACAACAG AATATACCGG CACTCCGGCA 
GGGGGACTGC TGAACTTTAT TATTCCGTCA ACCGATCCTT ACCTAAAAGA AGGAAAGGTA 
GGGCAATTTA TGTACGTCTA TGACGGTTGG CTTCCTTGTG CACGCTTAAA AGACGAAACC 
GGAAACGACA TCCTTTCCTT AGATGTCTGG AATTTTAAAA TTGTTGGAAT ACAAATACAA 
AAGGGCGGGG TGTCAATCTT TGAAAATGTT GTAAATCCTT ACAAGGGTCA GTCTGCCACA 
ATAGCTGCAC ACCTAAAAAA ATCGGGTATG CTCACAATTC AGATTATGAC TTTGGACGGC 
AATATAGTAC GCACCTTGAC CCGTTCTCAC CACAATGCAG GCGACCACTT TTATCTGTGG 
GACGGAAGAA ACAATGGCGG AAATCCCGTC GCAAGCGGTA TGTATTTTGT AAGAATCGCA 
GGGCCCGATA TAGATGAAGT GAGAAAAATT CTGATTATCA AATAA 

 

Protein sequence

MKKIQKALFI SIFLFAAEIL ASAQTVYTWT GGHGNFKNPS NWSPNLPAGT TPAAFPAGTY 
KILSAGPCFL TENITFAGPA QIEVGSETAA AGLQLAHYTL RGTVTVTVNK KGTLELSGTD 
EQRNLFSGGK IILKTDSTVV YYGNTGKDIW QGPYQNFKVT GNIKAQSLTV EKTTSIGNND 
PLITTVTIKV KTQTYKGAVT VQKDVTFDAA TSVTFTAAAN VNAGTQNLSF KGGGAVNMQG 
VTAGTVDATG ASSLKVNGTV TLSGDLKAKN LAVNTATVSA AKVEVSQATT VSTAATITAP 
TQTYTGAVSV NADTAFEAGT ALTFESAVFG FLKNIVIKGK DITFNSVVSA VDLTVMNKNG 
GTLTIKKNIT VSNSLIQKDM SPPYSPLGPV VIDSDSDVTI TAPKQVYNGA VTLKANTTFS 
AGAPSGPLAL QFEKAVASPA HKNIVLETVT STGIKTEQSV SAGKITVRNG TGNSSRWESY 
GIVSAEDDIE VAGVWQHSAS GNITAKGNVK AGTFKQTTPG STLIFAGNDT QTLEVGSSSQ 
IQRLKNTASL KLNSDIKIIE TFENNGSFAH NDKTVTFNSL FSKISGTREP TFFNLTIATG 
AELKTEQASV KISGTFTNNG TFTHNNKKVI FNGLLSKIAG STETEFYKLT VDANKILHLE 
QNIIVVDTFE NGGIFKARGN TVTLAPASTA ANIQGKNTAT DTEFAAISCL GAGGKTLTIN 
GKIMVANLKI GGASELNKLT VQGGASSEIT LTSDQTPDPG TKKGYYLDVN TNIPIADGKT 
YYVAESVLGN PNPKNWEHMS STWKTNATTT NWNTASNWTP EVVPAAGWPV IIPAGGTKYP 
KLTANVKAKT ITLAPGAKLD LADYVITKSN LVSDFTPITN NGTLRMKGTS YLTDPKGQKE 
WLESTVLANQ ITHGTTSVIE YYSTANNPLW QGPYQNLTVS EGRTSLTPII PGSGSTAADL 
IVEKTFTVAT DAGDNVIVTA NSQLYKQTVS LRKKTTFSSF GGTGTVFKGS VAASEIDIGF 
SGNGLIQTES AVTTKNITVN SGTGAWTSSG TITAYDITVN RSWTSSADVT SVGNITANGW 
TANNVRLKGN LTAARFNQLI GTLTFNGTGT PEQELNFNGA GNKNIFNLTI DTGAKVKLLS 
PVTIVRNITN YGIFDADTHT VTLDNNNSHT ITGTSYGDNT KKTEFHNLEC TGAVGKTLTI 
NGKITVENAL KLSGGGTSNR LIINGTGKIS LKTDHSGHTD LSRQFLKIDT RNLEVLEKPY 
VVNQSVDHNG KPKSHNGWVF YKDPATISIE NSLAKPGDEY IYLVFSNTSH MSEEELKFIG 
KPPYNCKLRI TGGSTTYESD LQDVSPANPE KTLWKIKLDK EIKANDILKP SCQVVLNYFG 
TNKTKPHISD IGINIVKPQK AFNSIVLRTF NANPDDKALP TLDITIPTER ESTVTSDNFK 
LYFISKDAPG RFWHPDTITL PPGSFANPQS GTTEYTGTPA GGLLNFIIPS TDPYLKEGKV 
GQFMYVYDGW LPCARLKDET GNDILSLDVW NFKIVGIQIQ KGGVSIFENV VNPYKGQSAT 
IAAHLKKSGM LTIQIMTLDG NIVRTLTRSH HNAGDHFYLW DGRNNGGNPV ASGMYFVRIA 
GPDIDEVRKI LIIK