| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0134 |
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| Symbol | |
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| ID | 2741329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 153544 |
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| End bp | 155070 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159004 |
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| Product | oxidoreductase, FAD-dependent |
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| Protein accession | NP_970751 |
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| Protein GI | 42525653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00168414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAC CCAAAATCCA GGATTCTCTT TTAGAGGACA GGAACTTTGA TGCGGTAATT
ATAGGCGGAG GAGTAATAGG CTGTTCTATC GCCCGCGAAC TATCCCGCTA CGATTTAAAA
ATAGCCCTCT TTGAAAAAGA AAGCGATGTT GCGATGCAGG CTTCGGGACA CAATGACGGA
ATGATTCATC CGGGCTTTGC AGATAATCCT AAAAAAATAA AGGGAAAGCT TAACACTCGC
GGAAACAGGA TGTACACAAA GGTTTCAGAA GAGCTGGGCT TTGAAATAAA CCGCTGCGGA
AGTTTTTTTC TTTTTCACCA TCCTATTTTA AAATTACTGG TTCCCATCAT GAAAAAAAGA
TGTCGCCTCA ACGGGGTGGA CGGAGATTAC GGCTACCGCT CCCGAGAAGC AGTAAAAAAA
ACAGACCCAT TTATGACCGA TAAAAACTAC GGCGGCTTTT GGCTTCCTTC GGCGGGAGTC
GCTTCGCCCA TGAAGGTTAC TATTTGTTAT GCAGAAAACG CTTGCGAAAA CGGAGTCGAA
TTCTTTTCTA ACACTGCCCT TATCGGCATC AAAAAAGAAG GTAATACTAT TACCGAACTT
ATAACCAATC GCGGCACTTG CCGAACAAAA CTTCTTATAA ACGCTGCCGG GGTTTGGGCC
GATAAGGTTG CAGGCCTTGC CGGCGACAGA TTTTTTTCGA TACATGCACG CAAAGGAACG
GATGCTATTC TCGATAAGAA ACTAAACGGT TTACAAAAAA CAAGCTCCGC CATGCCGAAT
CTTTTAAGAC TGAGCAAGGG GCACTCAAAG GGAGGCGGCA TCATGCCCTG TGTTGAAGGC
AATCTTTTAA TAGGCCCTAA TGCAGTAGAA GTTATGGATA GGGAGGACTT TTCTACAAAA
CCCGAAGCCC TTGAAGAAAT AAAAAAACAC TTAACGCTTA ACTCAAAGGT TTCGCCTTCA
GACATAATAA CCTACTACAG CGGAACAAGG GCCTGCACAT GGGAAGAAGA TTTTATCGTC
GAAGCTTCAG AGCGGGTCGA CAACTTGGTA CACGCTGCAG GAATTCAGTC CCCGGGCTTT
GCTTCCGCTC CGGCCATTGC GGAGGACATC GTAAAGATTT CCGTTTCAAT TTTAAAGAAA
AAAATAGATG TAAGTTTAAA AGAAAATTTT TCACCCGTCC GAAAGGCTAT GAAACCCGTT
TCCGAAATGG AAACTAATGA AAGGCAGGCA CTAATCGAAA AAAATCCCCA ATACGGAAAA
ATAATCTGCC GCTGCGAACA GGTCAGCGAA GGCGAAATAA GGGATTCGGT AAACAATCCC
CTAAACGTAT TTACCCTTGA TGCCGTTAAA AGAAGAATAA GAGCCGGAGC CGGCAGATGT
CACGGAGGCT TTTGTACTCC CCATGTTTTA AAAATTATTG CGGAAGAAAA AGGCATCCCG
ATAGAAAAGC TTACAAAGAA GGGAGAGGGT TCCGAGATTG TTCAGCCGAT AGAAAAGTTT
GAAGCCTTTA GCGGAGGCGA AAAATGA
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| Protein sequence | MRLPKIQDSL LEDRNFDAVI IGGGVIGCSI ARELSRYDLK IALFEKESDV AMQASGHNDG
MIHPGFADNP KKIKGKLNTR GNRMYTKVSE ELGFEINRCG SFFLFHHPIL KLLVPIMKKR
CRLNGVDGDY GYRSREAVKK TDPFMTDKNY GGFWLPSAGV ASPMKVTICY AENACENGVE
FFSNTALIGI KKEGNTITEL ITNRGTCRTK LLINAAGVWA DKVAGLAGDR FFSIHARKGT
DAILDKKLNG LQKTSSAMPN LLRLSKGHSK GGGIMPCVEG NLLIGPNAVE VMDREDFSTK
PEALEEIKKH LTLNSKVSPS DIITYYSGTR ACTWEEDFIV EASERVDNLV HAAGIQSPGF
ASAPAIAEDI VKISVSILKK KIDVSLKENF SPVRKAMKPV SEMETNERQA LIEKNPQYGK
IICRCEQVSE GEIRDSVNNP LNVFTLDAVK RRIRAGAGRC HGGFCTPHVL KIIAEEKGIP
IEKLTKKGEG SEIVQPIEKF EAFSGGEK
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