Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0109 |
Symbol | pheS |
ID | 2741724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 128923 |
End bp | 130470 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637158979 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | NP_970726 |
Protein GI | 42525628 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0230142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCA AAAGCATTAT AAAAAATCTT CATCCTCTTG AGATTAAGGT TTTAAAAAAT TTTAAAATAG GCGAGTATCT TGATAACAAA AAACTTGAGC TTAAACTTTC GTATAAAGAA GGCCATGCAA ATCAGGTTTT TTCGTGGCTT AAGATGAAGG GCTTAATAAA AGAAACCGAC CGCAAAAAAC ACATATTTTT TGAACTTACA AATATCGGGA CAGATTTTGC CGAACGCGGT ACTCCGGAAC AAAGAATTTT ACAGCTTTTA AAAGAAAAAG GCGAACTGAA GCTTCCTGAA ATTGCTGAAG CCCTTAATTT GGAAAATAAG GATGTAGGTT CGGCCTTTGG TGTTCTTTCA AAAGAAGGTG CCGTCAAGAT GAATGAAGAA AAAAGGGCTT CCTTTGTGCA AGAACCGCAA TCAAAACGCT TTAAGATAAC CGTCGAATTG TTGAAAAAAG GCCTTAAAAC TGAAGGTCAT ATCATAGCTG AAGAAGATCT TGATGATGAA GAACGCGAGA TTATCAACTC AATTTCAAAA AAACGCGGAG CTGCCGACAG TCCCTATAAG ATTGTAGAGC GGGATTCGGT TGTTTACGGG TTTACTGACG ATGTCCCTTC TCTTCAAAAA GAGCTTGAAG CAGAGGGCAT TACAGGCGAT GAAACAGGAC AGCTTACAGC CGAGAGCTTA AAAACCGGAA GCTGGAAAAA TCAAACATTC AGAAGCTACA ATATAAATCT TCCTCCTGCC CGTATAATTT CGGGAAGAAC CAATCCCTAT TGCGACTTTT TGGAGAGCGT AAAGGACAAA CTCGTAGGTT TGGGCTTTGA AGAATTTGAC GGACCTCTCG TAGAAACGGA TTTTTGGAAC TCGGATGCCC TTTTTATGCC CCAATTCCAT GCAGCCCGCG ATATTCATGA CGTTTACTAC ATAAAAAATC CGACTCATGC AAAGAGCATT GAGGAACCCT TTTTATCCCG CGTTGCCGAA GTCCACGAGA CAGGGGGAAA AACAGGAAGC CGAGGCTGGA ATTATTCTTT TGACAGGAAT TTTACAAAAC GCCTTTTGCT TAGAAGTCAA GGCACGGTTC TTTCCGCTCA TCAGCTTGCA AAGGCAAAAA TACCCGGCAA GTATTTCGGC ATAGCCCGAT GTTTCCGGTA CGATAAGGTG GATGCTACCC ATCTGTCGGA CTTTTATCAA ACCGAAGGAA TAGTTTTAGG CAATGAGGTT AATTTAAAAA CCTTGTTAGG TATCCTCAAA ATGTTTGCCG TCGAAATAGC AGGCGCTACC GAGGTTAAAT ATGTCGGCGG CTACTTCCCC TTTACCGAAC CTTCGATTGA AGTGCATATA AAACACCCTG TTTTAGGCTG GTTCGAGCTT GGCGGCTCAG GCATCCTTCG CCCCGAAGTA TCCAGAACAA TGGGTGTTGA TGTCCCCGTA TTGGCCTGGG GAATAGGCAT TGACCGAATG GCCCTCATGG CTCTTGGCTT AAACGATTTG CGAGAGCTTT TCAGCTCGGA TATTGAGGGA GTCAGGCTCA GAAAGTAA
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Protein sequence | MDIKSIIKNL HPLEIKVLKN FKIGEYLDNK KLELKLSYKE GHANQVFSWL KMKGLIKETD RKKHIFFELT NIGTDFAERG TPEQRILQLL KEKGELKLPE IAEALNLENK DVGSAFGVLS KEGAVKMNEE KRASFVQEPQ SKRFKITVEL LKKGLKTEGH IIAEEDLDDE EREIINSISK KRGAADSPYK IVERDSVVYG FTDDVPSLQK ELEAEGITGD ETGQLTAESL KTGSWKNQTF RSYNINLPPA RIISGRTNPY CDFLESVKDK LVGLGFEEFD GPLVETDFWN SDALFMPQFH AARDIHDVYY IKNPTHAKSI EEPFLSRVAE VHETGGKTGS RGWNYSFDRN FTKRLLLRSQ GTVLSAHQLA KAKIPGKYFG IARCFRYDKV DATHLSDFYQ TEGIVLGNEV NLKTLLGILK MFAVEIAGAT EVKYVGGYFP FTEPSIEVHI KHPVLGWFEL GGSGILRPEV SRTMGVDVPV LAWGIGIDRM ALMALGLNDL RELFSSDIEG VRLRK
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